NONHSAT131960
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT131960 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
659 nt |
Genomic location |
chr9-:79228924..79230078 |
Exon number |
2 |
Exons |
79228924..79229516,79230013..79230078 |
Genome context |
|
Sequence |
000001 TTGGGAACCC ATTTGACCTT CTGAAAAACA AGCTTTTCTT TAGTTATAAA CATCCATCTC AGTAAGTATT GACTTGAAGC 000080
000081 TGAAAGAAAA GCCTTAGTTG GCCATGCTGG AAGAAGAGGA TGCTTTTCTG GTTCATGGTT CTGTTGAAAC ATATCTACCT 000160 000161 GAAAGAGACA GGGCTGATGT TACCTTTTTC CACTTTGCAC TACCTGGTGC CATTCTAAAT TTCTAAGGGG AAAAATAGAA 000240 000241 AGTTTGTTTA CTCTTAAGAT ATTTTATGAA ATTGTGTGTA CTTTCCTATT TTGCCAATTA TGTGCCTCAA AGATTTTAGT 000320 000321 TGAGCCTTAG CAAGAAAGTA GGACCTTCCA TTTCAATACT TCATTAACAC GGTGTAGTGA TACTTTGTCC CTTAGACTGG 000400 000401 TGTTTACCAG TAAGATACCT TTAATCCACT GTTAAGTATG AGTGGATTTG TTTCCATAGA TTAGCTGGAT TTCCTTTTGG 000480 000481 TGATTGCATT AGGTTTAAAG TACACAGGTC TCAACTCTCC CCAGGAAAGT TTCCCCTGTT TGACTCCACC TTTAAAATCC 000560 000561 TAAGCCTGAC TAGGACAGCC ACAAACCACA CAAGGTGTAA AACCATCATC AGCTAAGTGC CCGTTTTGTT CTTGTTTACC 000640 000641 AGAATCTCCT TTAACTTCT |
Predicted Small Protein
Name | NONHSAT131960_smProtein_119:217 |
Length | 33 |
Molecular weight | 3929.8392 |
Aromaticity | 0.21875 |
Instability index | 53.265625 |
Isoelectric point | 8.23065185547 |
Runs | 6 |
Runs residual | 0.00414540816327 |
Runs probability | 0.0164429135017 |
Amino acid sequence | MLFWFMVLLKHIYLKETGLMLPFSTLHYLVPF |
Secondary structure | LHHHHHHHHHHHHHHHLLLLLLLLHHHEELLL |
PRMN | - |
PiMo | - |