NONHSAT132036
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT132036 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3484 nt |
Genomic location |
chr9+:82477934..82481790 |
Exon number |
2 |
Exons |
82477934..82480373,82480747..82481790 |
Genome context |
|
Sequence |
000001 GATGGGCAAT TTACTTCACA CGTTTCTTCT CTGGTCTGCC TGCAGGCTCT CGGGCCAGCG GCCGCCCCTT GCCCTAAAGG 000080
000081 CCTCTGCGCC TGCCCAGGAC AGCCAGGCCC TTTCTTATTC CTGTTCAACC CGCGGCGGCC TCCTAGGCCC TCCTCTCCAG 000160 000161 GCAGCTTGTG TGGCACCCCT TGTCCTCTCC CACATGACAA GGGTGACCCT CTGGAGTTCC TGCAGGCTGT GGCCTCTGAG 000240 000241 CCACCTGTTG GGAACTCCCG AAGGTTGCTG CACCCAGGGT CCCTGAGGAC CCTCCTCCCG TCCGCAAGTT CGCCCTCCCG 000320 000321 CTGCCTTCAC CACCTAAGCA GGTCCCAGCC AGGCTCCCGA AGGAGACTGA GGGTAGGGCC GAAGAGGAGC CCAGAACAGT 000400 000401 GACGCAGGAG CATCACGTAG AGACCCAGGA GCAGGATGAC AAGAAAAGAG CCCCCGTAGC CACGGCAGGA CTTCATCCAC 000480 000481 GTCTAGGGCC CTGGAGACCC AGGGAGACCT CACCTCCTTC GGGTGCAGGC CCGGGCCTCT GCAGGGAAAT GCCCACCCCT 000560 000561 ACCTGTTGGA AAACCATTTG AGAGAGAAGG CCCAGGTGTC TCCAGTGAGT GGCTCCTTCT GGGAGGGCCA TGAGGCCCCC 000640 000641 AGCTCACACA GCCCTGCTGG AGGTGGCCTT CCCCTTGGGA AGCCTGACCC GGCTCCAGCA GTGCTCCTgg ccccggcccc 000720 000721 ggccccggcc ccgggcTGCT CCCTGCAGCC AGAGAAGGCG GCCAGGAAGG TGCTGGATGA AGACCACCCA CCCAGCTCTC 000800 000801 CAAGCTTGCT GATGTCGGGG AAGAAGATGC AGGACAAGAA GCCTTCAGCT CTTCTGTCAT GGAACTCTTG TCCACTCAGA 000880 000881 GCTGCCAGCA ACAGGCCCTG CGAAAGGAAA ATGTGGATTC CACCGCTGCT GCTCCTGGCC CCACCCTGTG ATTGATGTGG 000960 000961 GATAGAAGTG AGTTGTCTCC ACCTGCTAAG CTTCCCTGCC TGTCTATTGA GGGATACCTG GGCAACTTGG AGAACAGCAT 001040 001041 GGGGTGTAAA CAGAACAGCA AAATCTTGGA GGATAAAATG GACAATTTGG AGCACAAAAC AGAGGCCAAG GCAAACTGCA 001120 001121 GCACCATCCA GCCTGCCCCT GCTATCTCCC CACATGCGGA AACTTCAGAC TCTCTGTCCC TGGCCACCTA CACTTTGCAG 001200 001201 GTCCCAGCTC CTCCTTCCAC CCTTGACTTG GCTGAGCCGG CTACCAGACC CCGCTGCCTG TCTGTCACAC CAAGAATATC 001280 001281 CAAAATCCCT AACTCTCCAT TGTCTCTTCC CACTGACCTT GTTCCCATAT TTTGGGTTCC ACCTAATGAG GAAGGAGGTT 001360 001361 CTTCTCATTC TGGAGTAGCT TCAGCATCTC CCACTTCTGA CCCCCTGACA CCTAGCCCCA CACCTTTCTC CTTCCGGCCT 001440 001441 CCCTTCAGAA GGGAGTTCCC TACAGCTGTG TATGTGCATT CCCTTCCTCC TCTTTCCTCT CCCGCCCTTC TTCCAGGACC 001520 001521 TTCCACCAGG ATCTCTGTTA CCACCAGCAA GCAGATAAAT TTCAAAGCAG TCATTTTCAC CATCACAGCA AACACATCTG 001600 001601 CCCACCACAC CTTGCAGCCT CCTTCAGATC CTCAGGTCCT CAATAGGGAC ACCACTTTCC CACCTAAGGC TGTGATGTTC 001680 001681 AGAACTTCCT CAAGCTCCAG GATGAACTCT CTACTAGTTT CCCAAATTGA TGGCAGTGCA CAGCAGGGGC CCCCTGGTAA 001760 001761 GACTCAACCT ATATCACCCA GCTACATTTA TATTCCCCAG CCCCACCCCT CAGCCCAAAT TTTGGGTCCC TGATTTGGCC 001840 001841 AAGGCAAACT GCAGCACCCC CCAGCCTGCA CCTGCTGTCT CCCCACCTGC AGAGACTTCA TACTCCCTGT GCCTGGCCAC 001920 001921 CTACACTTCC CAGGTCCCAG GTCCTCCTCC CACCCCTGAC TTGGGCATTG CCTCAGCCCA CATCTCCACC AGTTTGCCTG 002000 002001 CACAGCCAGT CATGAGACCA ATGACAACTT CTAACCACAC TGTAAATCTG GGAGCCACGG CTCCACTCAC ATTGGGGGCC 002080 002081 CCTAATGGGC AGCAGTGGAA AGCCTGTCTC CCCAGTACCC CTGTTATTCT GAGCCATGAT GGGATCATCA TGGCTCATCC 002160 002161 AGACACCTCC AGTTTAGGGA GCAGAACCTC TGCAGCATCA TCATCCATTC CTACCATTGA CAGCAGTGCT GTGGATACCA 002240 002241 CCCTTATTGA AAAGCTGTCA TCTTCCAGTC TGCCTCTGTC TCACGGAAGA AGTGTATCCT TGTCTCATCT GAGCCTCCTT 002320 002321 GGTTCTGGGA ATACAGATCC CAGTGGCAAC ATTGTCTCAG TTCATGTCTC CACCAGTTTG CCTGCACAGT CAGTGGTAGG 002400 002401 ACCAACTGTA ACTTCTAACC ACACTGTAAA TCAGGGAGCC TTGGGGGCCT CTGATGGGCA GCATTGGAAA GCCTGTCTCC 002480 002481 CCAGTACCCC TGTTTTTCTG AGCCTTCCCA TGATGGCTCC TCTAGACACC TCCAGTTTAG GGAGTAGAAC CTCTGCATCA 002560 002561 TCATCATCCA TTCCTACCAT TGGCAGCAGC ACTGTGGATA CGACTCCTTA TTCAAAAGCT GTTGTCTTTC AGTCTGCTGC 002640 002641 TGTCTCAAGG AAGAAGTGCA TCCTATCTTG TCTGGTGTTT CATGGTTTTG GTAACACAGA ACCCAGTGGC AACATTGTCT 002720 002721 CAGCCCACAT CTTCACCAAT TTGCCTGCAC AGTCAGTCAT GGGACCGATC CCAACTTCCC ACAACGATGT AAATCCATGA 002800 002801 TCCACCTCCC AGCCCATATT TGGGGCTTCT CATGGGCAGG ATAAGTCAGA CCGTTCTTTT ATTCTGGGAA ACCCAGCAAC 002880 002881 CCCAGCACCA GTTATAGGCC TAAGGTGTTC TTGCAGCCAG CCACCCAGTG ACAGCACAAT GGCAGCAGAT CTCACCAGTG 002960 002961 TGACATTACC ATATTTTGCA TTTGATTTGC CTATCAATGT GCAGCCAGGT ATGATTAAAA AACCAAGTGC TTCCCTCATT 003040 003041 GGCACAGCCA AGTCATCTAC ATTTAGAGAT ACCACCAGAA TGCCTGGCAC TGGAGACAGT AACTGCATCG GTTGACAATT 003120 003121 CTACTCTAGG CCCAGGGGGG ATAATGAGAC CTGGAGCCCC TAAACATGGT GAAAACATTG GGGTTAGCAT GTCTCTGCAG 003200 003201 TTCCACATCA AGAACACCGA AAACTATACC AGGATGGAGG GGAACAACCA GCACCAGCCT GTACCCCCAT TTGGTCAGGT 003280 003281 AGCCTGGGGC TCACCTGCTC ACACCACATT GGTTGTGGCT ACAAACACCA GCACCATCCT TGCTTGTTCC ACCTTCATGC 003360 003361 CAAATACCTG GCATGCACCA CTCCAGAACC CAGGTGTTGC ACTAGGAAGA GGCAACCACA TTCCCATTGT TGGAGCTCCT 003440 003441 CGTGGTTCCT TTTTCCATCA GTCCATGGTC GGTCCACCTG GACA |
Predicted Small Protein
Name | NONHSAT132036_smProtein_629:811 |
Length | 61 |
Molecular weight | 6845.0352 |
Aromaticity | 0.05 |
Instability index | 81.5816666667 |
Isoelectric point | 11.8275756836 |
Runs | 9 |
Runs residual | 0.000265957446809 |
Runs probability | 0.0279397044103 |
Amino acid sequence | MRPPAHTALLEVAFPLGSLTRLQQCSWPRPRPRPRAAPCSQRRRPGRCWMKTTHPALQAC |
Secondary structure | LLLHHHHHHHHHHLLLLLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLHHHLLL |
PRMN | - |
PiMo | - |