NONHSAT132534

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT132534

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3019 nt

Genomic location

chr9+:82503916..82506922

Exon number

1

Exons

82503916..82506922

Genome context

Sequence
000001 GGTCATTCCA GATGCCTGCA GGTGATCAGA TATCTAAGTA ACCCTCTTGC CACCAAATAC CACACACACT TCAGTTACTC 000080
000081 TTTCAAAAAA AATTATCAAG CAACTGCTCT GTGCCAGAGA CTCTTCTAGT CCTGAAGATA CAGTGATAAA TAAGATAGAG 000160
000161 ACAGTTCCTG CTGCCATTCA GCTTGGTTCT AGTGAGAAAG ACAGATATAT TAAAAAATAA CTTGACATTA CATTTTCAAG 000240
000241 AATTTAAGTA CTTTATTGGA AAATATAACT GTGTAAGAAG ACAGATATTG ACAAGGACAC TTAGTTCTTG TAGCGAGGAA 000320
000321 GTATAGACTT AACTCTTATT ATTAAAAGAG TGTTTAAGAA TAAAAATATA TCAATACCCC TAACTTTGGA GACAAACTGA 000400
000401 AGTACTGAAT GTACTTCTAT TTTTGATTTT TCCCTTAGCA TGGTGAGTTG TTTGGGAAAT GATTCAATAG TTATTTGTAG 000480
000481 TTTCTAAATT CTCAGCAGCA GTTGCCTCCT GATATGTGTC ACTATATATT CTGAGTTGAC ATCTGTTATC TGAATCACCA 000560
000561 AAATAGTGCC TTGTTTTAAA ATTTATCCAC TATTGGCTTA TGTTTTATCT TACTCTAGGC CATGTTATCA CTACATGTGA 000640
000641 CATCTCTGTA TATGTGTTTG TGAAACTGGG ATAAAGTTGG CAAAACTTGA GATAGAGGAA ACTATCTATG AAACATGTTT 000720
000721 TGCATTAGTA GAACAGGAGG CATAAGCACA TTTGGAATAG AAAGAACAGA GAAGGCGATA CTGGAGAAAT AGGATCTCAC 000800
000801 AAAGGAAAGT AGAATGCACG TAGAGAACTT AAATGCAATT TAGGCAATAA CCTATGCAAT TTGGACAACT ATAGACCTAC 000880
000881 TATGGCTTAT GGTTTCTACC AACTAGACTT AAGCTTCTTT TGGAATAAAG CCTTTGCTTC ATGGAGGAAG TCAGTTAATG 000960
000961 TTTGTTGATT GTGATTTTGA TGATGACATT CATGATGATA TTCTATTTGG GGAATGTTTT TCAAAGTGGG GCTTTGACCT 001040
001041 GACAAACTGT TATACCGATA GAAAAATCAA CATTCTCTCA CTGACACCTT AGGTATTTGA CAGATATCTG AAAGAAAAAT 001120
001121 AATTTGATAT GACCAAGCAA TAGTGAAGTG TAGGATATTG ATCTCCAGAG ATTTGTGAGA CTAAAAATTG TGCAAACGAA 001200
001201 TAAAAAAAAA ATCATAGTCT AGATTATCCC AATGTTGAAC AATATACTTA TGTTTACACA TAATGTTGGA AAAGGCATCA 001280
001281 GTGCAATTTC TACAATGCAC TGATGATAAT GATAATGAAA TTTTAGTGAC AATGTGATAA TGAAATTTTA GAAGAAATTA 001360
001361 TAATTAGTTT TTCATCTCTC TTAAATGGAT GTGTTGTTTT TTCTGTCCTC TTCCTTCTCC ATTTATGCCT GTTCTGGTTC 001440
001441 CTTGTTGACT TGGGGAAATA TACATGTGGG TAATAAGGGT GAACATTTCC GCAGAAACAA AGCAGGTCTA CTGTGCTTCA 001520
001521 GCAGGCTTAA CTCTCATTTG TTCAATGAGG GTTTGGAAAG ATGGGGGGGT TTCCTACGTA TAGTCAATGC ATACTTAAGA 001600
001601 ACACCTACTA TGTGCTGGCT TCATTTTAGT CTCTAGGAAC TGGGAGACAT ATTGAGCCAT CTGTATCTAC ATATATTAAA 001680
001681 ATTGTTGTAC CGAAGAGTAT TTCAAGGTCT TCTATCTGTT TTCTTTTGGA TAGAAGCAGT CAGTGCAAAC CAGCATGGTG 001760
001761 AATGAGCTTG ATTGTATTTA AGAGAAAAAA TTCTCACTTT TGGGGTTTTT GCTACCAATT TTAAGAATGG GGAGCTGTTT 001840
001841 TCAGAACTAA AAGTTTGCCA GCGCACTAAG ATGTAAAATG AAGAAAAATT AAAAAATAGC TCTATGGTTT CAAAGAATGT 001920
001921 GGAGCTACTT TGGCTTCATC GGCAGAGTAA GTCTGTTAAT AACCCCGAAG CTCTCCCCTT GTTGAAATAA CACAAATTAG 002000
002001 CGTTTAACCT GGGAGGAAGA CACGTGAAGT TATTTAACAT TTACATAAAA TTATGGAGTA AACTCCAAAC AGGTCGCCTC 002080
002081 CAAAATGTAT AATTACACTC AGCAGTCCTG TCAGCATACA TAGAAACAAT TTTATTTCCA ATCATCTTCT GCTTTTATTC 002160
002161 ACTCAGGAAT GTATCATTAG AATTTCCACA GAACAATGAA CCTTAATAGG CGCTAATGCA ATTGTGAATT ATGGTAATTG 002240
002241 TTACCTAAAT TAATCTCTGT ACTTTCCATT CCTTATTGCC CTGTGCATAA GGAGTGTGAA AAAGATAATG TTGAAACTGA 002320
002321 CATTTGTATA AATGGTATAA AAATTTATCT TATTTAATAA AAATTTAATA TAAGAACTTG CTACTTTGTA AAGTAGTTTA 002400
002401 CTTAGAAAAA AATGTTAGAT TTGTTGCAAG TTGGGTTTAT AAAATCTTTA ATTTGTGAAA TTTGGGAGGG AAACTGGCAG 002480
002481 TTGACTCATT ATGGTTATCT TTGGGGTATG TGTATGCACC GAGGTATCGG GATGGTACAT GTATGTTCCT CCGTGCACAT 002560
002561 ATTGCCAGGG CAGTGTATGC ATTCGTACCC TTATCTGTGT GCCTGGCCTC TTTCTGTGTG TTTATGTTTA CTCATTTACG 002640
002641 TAAACTACCC TCTTGGTGTA ATAAAATCCA CCATTATGTG TTGAATTGTG TTCCTCTCAA ATTCATATGC TGAAGTCTCC 002720
002721 TAGTTCTTCA GAATGTGACC ATATTTGAAG ATAGGACCTT TAAAGAGGTG ATTAAGTTAA AATTAGGCCG TATGTTTGGG 002800
002801 CTCTAATCCA GTGTGACTGG TGTCCATCTA AGAAGAAATT AGGACAGAGA CATAGAGGGA AGACCATTGG AAGACACAGG 002880
002881 GATAAGATGG CTGTCTACAA GCCAAGGAGA GAGGCTCCTG AAGAAACCGG CCCTGCCAAT ACCATCTTGT CAGATATATG 002960
002961 GCCTCCAGAA CTGTGGGAAA ATAAATTTCT GTTGTTTAAG CCACAAAAAA AAAAAAAAA
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Predicted Small Protein

Name NONHSAT132534_smProtein_2411:2683
Length 91
Molecular weight 10296.3694
Aromaticity 0.122222222222
Instability index 49.9355555556
Isoelectric point 6.91827392578
Runs 16
Runs residual 0.0379188712522
Runs probability 0.0425112612613
Amino acid sequence MLDLLQVGFIKSLICEIWEGNWQLTHYGYLWGMCMHRGIGMVHVCSSVHILPGQCMHSYP
YLCAWPLSVCLCLLIYVNYPLGVIKSTIMC
Secondary structure LLHHHHHLHHHHHHHHHHHLLHHHHHHHHHHHHHHHLLLEEEEEELLEEELLLLLLLLLL
LLLLLLHHHEEEEEEEEELLLLLEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL
LHHHHHHHHHHHHHHHHHHHHLLLLLLLLL
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