NONHSAT132725
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT132725 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1144 nt |
Genomic location |
chr9+:85320546..85327787 |
Exon number |
2 |
Exons |
85320546..85320675,85326774..85327787 |
Genome context |
|
Sequence |
000001 gattgaaagg agaaagaggt tgagggatag tgagggaagt tggagaaggg agtaaaaaga ggccgcttac cggatttgaa 000080
000081 atcggtgaga tgtttcttgg gctggtcggt ctgaggacct gaggtcgtag ggctgcccat ctagtttctc aattatccac 000160 000161 tgccaaatat ggctaagaaa gcctgattgc tgatgtgttc ctgctgtccc tatgatagat gtgccacctt gtctttggtg 000240 000241 attaagtact gctgcttggc ctctgctact gtgggttccc ctcagcccca ctgaaatcaa ggagcccata gtgacagtca 000320 000321 tacttaccct acaaaagata gcagcgagag aacttttcaa ggatacaatt gctcccccta ctaagacatt tttaaattct 000400 000401 gaagggaagg gcatactttc tgggctctct catgaaacac agttggggag taaatgtgca ggccacacat aacaaatcca 000480 000481 gtccatcaat tcaattatct ccgcagtctt ttgagttctc ttctccacaa catttcaggg aagctctgga atctcaatct 000560 000561 tattaaatgt agcctaccat tgcattggag tttcggttaa tctgttaaag ctacccacaa ccgcagaagc taaaacataa 000640 000641 atctaaagtc tctagtaagc gcatcatatc aaagaaattc agccaaattt agtgttatat tttgtcatct ttgttctaag 000720 000721 acccttagcc atgttcccac acattttcta cagatttttg ctgatatgta ttagaaaagt cctgcaatcc cttcataatg 000800 000801 taagctatcc tttcctgggc tgttgtgtgt tcactgtctc ctatagcttg gtgttatctc accatagcca taggtctagt 000880 000881 agcaacagga ggtggttgta gtacgtcttg agaaggttat ggtgtcttcc cccggtgagg ttatcacagg cttttcatgc 000960 000961 agaggaaggc tagtttcctc aaatcttgga gagcaagcta cttccactga taagagaagc acagaatgac tatgtggccc 001040 001041 aaattaccac ttcttgttgt tgttgttgtt gttggtgttg ttgttgttgt ttttctgagc tcagccatat gtccaaattc 001120 001121 caagattcag gatctcatta tttt |
Predicted Small Protein
Name | NONHSAT132725_smProtein_431:565 |
Length | 45 |
Molecular weight | 5020.4216 |
Aromaticity | 0.113636363636 |
Instability index | 96.3954545455 |
Isoelectric point | 6.81427001953 |
Runs | 9 |
Runs residual | 0.0414438502674 |
Runs probability | 0.0401479911284 |
Amino acid sequence | MKHSWGVNVQATHNKSSPSIQLSPQSFEFSSPQHFREALESQSY |
Secondary structure | LLLLLLEEEEEELLLLLLLEEELLLLEEELLHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |