NONHSAT132734

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT132734

Source

NONCODE4.0

Same with

,

Classification

intronic(AS),antisense

Length

3677 nt

Genomic location

chr9+:85882090..85885748

Exon number

1

Exons

85882090..85885748

Genome context

Sequence
000001 CATGGCCCAG GGCAGCCTTT CCCTAACAGT CCGTTCTGTT TTAAAGGACC TAGGCAGGAC CCACTGAATG AATCAAATGT 000080
000081 CAGGTTCCTA ATGCGGCCAA CAGAAATAAC TCATGAGGGA TCAGCATTGG GAGGGGAGGA GGGAGGGGAC GCTATTTTTA 000160
000161 AACTCTCCAC TCACCCCTCT AACAAACAAT GAAAGATTAT GCATCATCCC TACTCTAGCC TTTCTAAACC TTCCGGACCA 000240
000241 AAACAGAGGA CCCTGTCCAA ATGCCTCATC ATTTCCTAAG AATCAAATGT CCCCAAAAGA TAAGATGACA ACTGGATAAT 000320
000321 TCCATAATGG AGAAATAACC CACTTTTTCT TCTAAAAATT GCTCCTCCAG CCTTTATTAT ATTCTACAGC AGTACTGTCC 000400
000401 AGTAAGATTA TAACACAAGC CACTTCAAAG AGGGAAAAAA AGCATTTAAA AAGCAAAATA AATGTATTAC AATTAATTTT 000480
000481 AATAATGTGT TTTATTTGAA ATCGAGATAT TCAAATAGTA TCTCAACAGG TAATGATATC AAAATTTATT AATAATTAAT 000560
000561 CAACTCTTTT ATTAATAAAG AGTTTGCATT CTTTTTTGGG ACGAAGCCTT TGGAATTAGT GTGTGTTGCA CACTGCACAT 000640
000641 GTATAGCACA TCTCAATTCG AACCAGCTCC ATTTCAAGTG TTCAGTAGCT ATATATGGTT GCTGTCATGG TAAGCTCAGC 000720
000721 TCTTTTCAAA GTGCTGGATT CCTCACATGC CTTATCTCCA TCTCATAACA ATGCTAATCT TTTCTTCACT TTACAGATAA 000800
000801 GGAAACGACA ACTTAGAGAG AGTAACTGAC CTGACCACAA TCACGAAGTT AGTAAGTGGC AAAGCCATGA TTTGAACCTA 000880
000881 GGCTTCCAAT TAATATCGGC TGACTAAAGT TAGTGTTCTA AATGCAGGTG CCATGCAACC ACTACATTCT GACTTTTCAT 000960
000961 GAAAAGGATG AGAAGAAAAA ATTTTCCTCA CACAATTTCA ACACGCCCGC ATACATTCTT CTACTTTAAA TATCTGTCAC 001040
001041 CAAAAGATGA TTTTCTAATA ATCCTCTATG AAACAAAGGT TTATTCAGAG CAGGAATTGA AATTCCATGT TGTTATGCAT 001120
001121 CAATATAAAA TTGATTTAGC ATTTCTGGAA AGAAAATTAG CAAAATACAT GGAGTTTTAT AGCTGTGGTA TTCTTTGAAC 001200
001201 CAGAAATTCC ACTTTTAAGA ATTAACCCTG AGAAAATAAT CAGAAATGCT GACAAAAATC TTAAGACAAA GATGTTCATC 001280
001281 AGAGTATCAT TTATTATAGC CAAAAATGTT TTTTAAGTCA ACCTATATTT CCAGTGGGAA AATGGTTAAA TACATGTGAT 001360
001361 GAAATATTGC ACAGACATTA AAATTCATGT TTAGAAGAAT TTAATGATGT GAGAAAATGC TTGCAATATA CTACTAACTG 001440
001441 AAAAAAGCAT CTTTATATAA ATGGTGTGGC ATCGACTATG TAAAACTGCA CACAGGATAA ATGTAAGACC AGACAGTAAA 001520
001521 TCCCAGAAGG GAAAAAGGGT GTTGCCAGCC ATGCACTGTG GCTGAGGTGG GGCAGGCCAT TTCCAGGGAC CTCAATGGGC 001600
001601 CCCCCACTCC CCTCTCCTGG GTGAGCAGCC TCCAGTGTGG CAGAGGAGTT CCTACTCTCA CAGGAGTTAG TTAATTTTCA 001680
001681 ACCCTGAAGC TTGAAAGGAA AATATCCCTA AAAGTTCTCA AAATCTTCAA CCCTTTGCAA TTCCCCCTGA TTATATAATT 001760
001761 CTGAGCAGAA TCCCCAGGTT TAAAACAGAT AGACTGACGC AAAGGTGGGG CCCAGGACTA GTACCTACTA CACCTCCCTC 001840
001841 ACTAGTCACC AACAATGGTT CTTGAAGAAC TACTAAAAAT CTTTAGGACA CTGAAGAACA AATCTGAAAA TCACTGTTCA 001920
001921 CAATAAATCA CTACTTTGCA GTAACACACG ATGAATTTCA TAGATTAACC GGGGCTCATT TGCATGGCAG TAGGCCATGG 002000
002001 CTCAATACTG AGGAAATCTC CCTTTGGCCT GTCTGAAGGG AATATAGATA AATCTTTATG TTTAACATCA TGTTAAAACA 002080
002081 ACATATGACC TGACAGCTCA CTTGAAACAA ACAGACCTTC CAAAGACAAA AGAGAAAACA AGTAAAAAAC CTGAAACAAA 002160
002161 ACTATCACCA TATTTTATTT CTGTTTTTTT CTACCAGGAT AGTTATTCTC CATAATTCTC AAGCTTAACA TCTCACCATT 002240
002241 GTTTCAAATG CCTCCTTCCT ACCTTTCATT TTAAAAGTAT TATTATCTTT GGGAGGCCGA GGCCGGCAGA TCACTTGAGA 002320
002321 TCAGGAGTTC AAAACAAGCC TGGCCAACAT GGTGAAACCC CATCTCTATT AAAAATACAA AAAAATTAGC CAGGCGTGGT 002400
002401 GGCGGGCACC TGTAGTCCCA GGTACTCGGG AGGCTGAGGC AGGAGAATTG CATAAACCCG GGAGGCGGAG GTTGCAGCAA 002480
002481 GCCGAGATCT CACCGCCGCA CTCTAGCCTG GGAGACAGAG TGAGACTCTG TCTCAAAAAA CAAAAGTATT ATTATTATTT 002560
002561 TACTATAAAC AAACAAACAA AAGTATTATT ATTATTTTAA CTATAGCCAG TCATAATATT TAGCATTTCA CATGTTTTTC 002640
002641 ACTTTTTCCC CTCTTAAACC TGCTCTCACT CTTTACGCTA CTTTTCAGAG ATCGTAAGTA GATTCCTTTA CTCTTGCTTT 002720
002721 TTATGGATCT TCTCCTTTCA TGGAGAAAGA TAAGCTAGCA AGACAAGCAT TCTATATTGC CTCAGCCATT TCTCTCTACC 002800
002801 TTGTCTGACT CTGCCCACAG GGGTGTCTAC CTTTCAAGAG GAACAAGAAA AGAGAGGTGG GAATATGGAA CCAAGCCAAA 002880
002881 GATTCTGCAG GATCCTGCAC AGTGAGCATT GTTCTGGTTC AGGCCACTGT GCTCAACTGA ACAGTATCAG TAGCACAACA 002960
002961 TTTGGATGCC CTTGAATACT GTTCCTGTTT CAATTCATTT GTTTGTCTGA GAATTGGGAA TGCATGTCTG GGCAGTGACA 003040
003041 AGAGGCCAAA GAAAGCAGAA GATGTGTGAA GAGGAGAATC GATTTTCCAT AATGAGATGT CAGAAACACT GCTTGCTAAG 003120
003121 TCAGCCTGAA ACCAAAGAAG AAGAATGGCA TTCAGTGATA AGAACTGTTC ATGAGCCTGA ATTCCATGGC TGCTCCTGCA 003200
003201 CAAACCACCA GACACAGATC CGGGGAAAGG CAACAAAGTT GCCTCTACTT TGTGAGTGGC TAGAAGTTAC TGGACATCTG 003280
003281 GGAGCCCTGG TGCCTTGACT GTAAAATGGA GACAACAACT CCTCTCATGG TTGTTATGAC AAGGAAATGA GAGATACATA 003360
003361 TCAAGTGCCT AACATAGAGC TGGCTCCTAT GAACCAGAAC TTATTAAGCA ATTGTAGAAG GCAAGATTTA AAGCACAGAC 003440
003441 TTTGGAGCAG TCCTTGGGTT CCAATCCTGG CTGCATCGTT TATCATCTCT GAGCCTCAGT TTCCACATCT GTAACAAAAG 003520
003521 CTTTCATTTT ACAGATGTAA AAGCAGTGTG TACCTCCAAG GGGTGGTTGT GAGGATTAAT CAAGTTAATA CACATGGCAT 003600
003601 TCTCAGATCA GTGCCTTGCA CGGCAATTTA CTCAATAAAT GTTAGCGATT TTTTTTCAAA AAAAAAAAAA AAAAAAA
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Predicted Small Protein

Name NONHSAT132734_smProtein_2864:2974
Length 37
Molecular weight 3909.3503
Aromaticity 0.0555555555556
Instability index 48.5055555556
Isoelectric point 6.79425048828
Runs 6
Runs residual 0.0137917637918
Runs probability 0.0456338691632
Amino acid sequence MEPSQRFCRILHSEHCSGSGHCAQLNSISSTTFGCP
Secondary structure LLLLLLEEEHHHLLLLLLLLLEEELLLLLLLLLLLL
PRMN -
PiMo -