NONHSAT132848
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT132848 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2015 nt |
Genomic location |
chr9-:89623366..89657041 |
Exon number |
2 |
Exons |
89623366..89625125,89656786..89657041 |
Genome context |
|
Sequence |
000001 GTCACCCCTT TCTCTGACTA GGAAAGGGAA CTCCCTGACC CCTTGCTCTT CCCGAGTGAG GCAATGCCTC GCCCTGCTTC 000080
000081 AGCTCGCGCA CGGTGCGCGC ACCCACTGAC CTGCGCCCAC TGTCTGGCAC TCCCTAGTGA GATGAACCCG GTACCTCAGA 000160 000161 TGGAAATGCA GAAATCACCC GTCTTCTGCG TCGCTCACGC TGGGAGCTGT AGACCGGAGC TTATTCGGCC ATCTTGGCTC 000240 000241 CTCCGTTCCC TCTATGAGTC CAACCAGGAT GGCGACTTGA CTGGATTTTA CAGTTTCATT GACACGCATG AGCTCTATCA 000320 000321 AACTTCTGGG AGTTTTTCTG AAATGTTTAC ATGGAAGGCA CCTGGAGCCC ATTGAATTTC CCTCTTCAAA TGCTTAAGTT 000400 000401 TTCTTCTGTC TTGGTGGCTA CTGCCTCCTT CTCACTTTCT GCCTTAGGTC AAGATAAATG AGTTTTTCCC CAAGAAAGCC 000480 000481 ATATGGATCT CTGAGGTTTT GAACTCTAAC CAATGCTATC TCGTTGATTG CCTTTGGATT TCAGGGTCTT ATTTTACGTC 000560 000561 AACCTCAGCC TCTCTCTTCT GCAGTTCCAT ATCCACATGA GCTACAAGAG TCCCATGTAG GTCCCTTCCT CTGCTAATAG 000640 000641 CTGCCTCATT GTACTGCTTC TGTATTCACT TCAGAGATAG AGGATCAAAT GGTAGAAACT TTTGGCAAAC TTTTGACCAG 000720 000721 AGAATGGCTT ACATGGGAAT TAATTATGCA CTTGTTCGTT TTACTCTATA GAACAATCCC ATCTGTATTG GATCTGTATG 000800 000801 TTCCATCTCC CATGTGAAAG AAGCACCCTA CAAAGATAAC TTCAGTCTGG GCACAGTGGC TCACACCTGT AATCCCAGAA 000880 000881 CTTTGGGAGC CTGAGTGGGG AGGATCTTTT GAGCCCAGGA GTTCGAGACT AGTCTGGGCA ACAAAGAGAG ACCCTGTTTC 000960 000961 TAAAACAAAA ATAAAAACAA AGATATCTTC CGAGCCTGTT CAGTCTTTGG TCCTGGTTTA GATATAGGTA TATAGAGAGA 001040 001041 GCTATTTGAG TAATCAATTC CCAATATGGT ATGATTTGAG CATTTGGAGA GGTCTTCTTT ACATATCATA GTACTTAGAT 001120 001121 TATTACCAAT AAATATTTTT CTTTTGGGGT TAACATTACA GTAATAATAT ATTTTGAATC TAAAATTTGG ATGGAGACAC 001200 001201 AGGACACAGA ATATATAATG CTCAAAAAAT GTAATGCTCA ATGAATGTCT CTATCATATT CTTTTTTGTT GTTGTTGTTG 001280 001281 TTATATAGAT GAGGCCTTCC TATATTGTCC AGGCTGGTCT CAAACACCCA GCTTTGCCTC CTTATGTGCC AGGAAAACAG 001360 001361 GCCTGAGCCA CCAAGACTCT CAATATATTA TTAAAATATA AACAAATTAC TTGAAGTGGT ACCCCTCAAA ATAATGTCAT 001440 001441 TTTCACTTTA ATGTAAATTA GTCTTACTAT AAAATCACTT TCCTGCTTTC AACAAGTTGC AATGTAAGAC GGGACATTTT 001520 001521 CTGAAATGGA GAGAAGATAA ACATGAAGTA AGAAGCTTTG TCCCCAGCAG GCTTTTCCTG GCAGAAAATA TGGACATCTG 001600 001601 GGTGGTGTCA TAGTCAGGAG GCCAGGAGGA AGGATTTGCC AAAATGGGTA AACTGGGCAG TGCATGAAAA CTGGTGCCTT 001680 001681 TGCTCCTATG GGCCATCATC CTGTTGATAG TGAGGTACCA AGAGAAGTGC TGATGGTAAA GCCCTGTGTC CTCCCCATCC 001760 001761 ATGATCTTGG CCGAAAGCAT TAACCTCCGA AGAGTCTCGG TGCTTTTAGA GACTTCCTGG TCTGAAGTGA CTGCCTGTTG 001840 001841 TGGACAAAAG CTGAAAACAA ACAACATAAA AACAAACTAA AAAGGTCAGT TACTCAAGGA TCTAGACAAC TAGCCAACAC 001920 001921 CTCCACAAAC AAATGGGAGC TTAATAGACT TTGCAAAATT ACTTTTTATC CAGTTGTTTT TTTTTGCTTA TTTAATAAAG 002000 002001 TTGAAAATAC AATGC |
Predicted Small Protein
Name | NONHSAT132848_smProtein_1760:1879 |
Length | 40 |
Molecular weight | 4365.0626 |
Aromaticity | 0.025641025641 |
Instability index | 50.3025641026 |
Isoelectric point | 8.84063720703 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0257198374845 |
Amino acid sequence | MILAESINLRRVSVLLETSWSEVTACCGQKLKTNNIKTN |
Secondary structure | LEEEEEEEEEEEEEEEELLHHHHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |