NONHSAT132864
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT132864 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1064 nt |
Genomic location |
chr9+:90272331..90283863 |
Exon number |
2 |
Exons |
90272331..90273042,90283512..90283863 |
Genome context |
|
Sequence |
000001 cccccgctgt gagagacatg atgtcatgga aggcagggtg gtgcagtcta atgatgacac tctgcacctc ttcaagcgag 000080
000081 tagttcacct ggtctcagaa ccatgtttct tatcaaaaac tttagatatt cctgggcacc cctatgaatt cagtacagtt 000160 000161 ccctgggtta ccttggcaca caatttggga accATAGGCA CAAACAAGGC TTATGGGCTT GTCCTGGTAT TTTCACTAAT 000240 000241 TAGGATGTCT TCAATATCTG TCTTCCATGT CTTCTTCCCT GGCTGTGTCT AAATTTGAAC TATGGTGCAG ATCTTGCTGG 000320 000321 AACTCTGGAC CTTGAGCCCT TGACTCCTGT CTCTTTCAGG CCAGCACAGC AGGAAACTTA CTTAAGTTAT CTTTGAAGTT 000400 000401 GTATTTTGAA GCTCCTCTTT TAATTGCAAA GTACTTGGAA AGGTTCTGCC TGGCTGGCCT GCCCCAGTGG AGAGCAAGTT 000480 000481 TCAGGAGAAG GGAGATGGCT CCTTCCTCCT TTCTGGTGGG CCCTGACCCC TTCCTTAACC TTGTGTCTCC GGAATGTCAT 000560 000561 CCTCAGCAAC TGCGTGAGAA GAACGACCTT TGGCCTTTTT TCTCTCTTCC CAGTATGGGC GAACGCCTCT GCACCTTGCG 000640 000641 GCCAACAACG GAATCCTAGA CGTGGTCCGG TATCTCTGTC TGATGGGAGC CAGCGTTGAG GCGCTGACCA CGGACGGAAA 000720 000721 GACGGCAGAA GATCTTGCTA GATCGGAACA GCACGAGCAC GTAGCAGGTC TCCTTGCAAG ACTTCGAAAG GTGAGAAGTT 000800 000801 CTGTTATAGG TCTGAAGTTC TCTACCTGTG TTTATGTGAA AAAGTCTCAG TCTTTTTCCT TATTTGAGAA TGAGCAAAAT 000880 000881 GAGGCTCTAG ACAGCCAGGT TTTAGGAACA GTGGTCCCTG TCCTGTGGTT TACATGTCAG TCGGTATAAA TGCATCAGCT 000960 000961 CCCTATCTGT TTTCTTCTCT ATTTGGACTT GGAAATCATT TAGCATGTTT GCAGTTGCCG TGCCTGGTTT TCCTTCTCCC 001040 001041 ACTCTCTCTA TAATAAACCA CTCC |
Predicted Small Protein
Name | NONHSAT132864_smProtein_494:658 |
Length | 55 |
Molecular weight | 6117.9617 |
Aromaticity | 0.0925925925926 |
Instability index | 93.087037037 |
Isoelectric point | 5.00457763672 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0465591642063 |
Amino acid sequence | MAPSSFLVGPDPFLNLVSPECHPQQLREKNDLWPFFSLPSMGERLCTLRPTTES |
Secondary structure | LLLLLEEELLLLLLLLLLLLLLLHHHHHLLLLLLEELLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |