NONHSAT133151
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133151 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
808 nt |
Genomic location |
chr9-:94870442..94877620 |
Exon number |
3 |
Exons |
94870442..94871116,94874737..94874844,94877596..94877620 |
Genome context |
|
Sequence |
000001 GGAGATGGTA CAGGCGCTTT ACGAGGCTCC TGCTTACCAT CTTATTTTGG AAGGGATTCT GATCCTCTGG ATAATCAGAC 000080
000081 TTCTTTTCTC TAAGACTTAC AAATTACAAG AACGATCTGA TCTTACAGTC AAGGAAAAAG AAGAACTGAT TGAAGAGTGG 000160 000161 CAACCAGAAC CTCTTGTTCC TCCTGTCCCA AAAGACCATC CTGCTCTCAA CTACAACATC GTTTCAGGGT AAATTGATTT 000240 000241 TGCTACCTGA AGTACTTGTA TTTGGCTTCT TGTAGTAACC TGCAGTCTAT AGTGCTTTAT ATGTAGTAGT CCTTTTTTTA 000320 000321 TCTGAAACAA AACATTTTGA AGTTCCCAGG AGTAACAGCT TTAGCTCCTG ATTTTAAAAA ATTTATTCTA GGGATGATAC 000400 000401 AGGCATTTTT TAAAATCTCC AATTTAAGCA TTAATGTTTG CCCTTTTTTC CAAGAATGCA CACATGTTAA TATTTCCAAT 000480 000481 GGTCGAACAC TTAAAATGAA AAGCAACAGA CTTCTGCTTT TTACCCATCT GGTTATTTTC TGATTTTAAA TTTGTCGCAC 000560 000561 GTTACCCTCA TAATTCTAGA TACTGTATAG TATGCTTAAC TACCATTTGT TGATTCATCA ACTACAGACA ACACCTGTTG 000640 000641 ATCCCCACAA TATGAATTAT GGAGCTTCCG CTCACTTATG CCTCTTTCCT CCTTGCTTCC AGTGTCTCAT CTATTTTTTA 000720 000721 CTTTTCATTC TCTTGGCTAT CTTTGCTATA TTGTATGTAT TTTCATTAAT TAAGAAATAC AGTAAGAATA TAGAAAGTTA 000800 000801 TCAGATAT |
Predicted Small Protein
Name | NONHSAT133151_smProtein_677:772 |
Length | 32 |
Molecular weight | 3576.2951 |
Aromaticity | 0.193548387097 |
Instability index | 40.9935483871 |
Isoelectric point | 6.67938232422 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0837837837836 |
Amino acid sequence | MPLSSLLPVSHLFFTFHSLGYLCYIVCIFIN |
Secondary structure | LLLLLLLLLHHHHHHHHLLLLEEEEEEEEEL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTi |