NONHSAT133326
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133326 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
879 nt |
Genomic location |
chr9+:97317446..97330184 |
Exon number |
3 |
Exons |
97317446..97317627,97321251..97321434,97329672..97330184 |
Genome context |
|
Sequence |
000001 tttctattga gctgctcagt gcccggctta gaagaccagg aaaaggagtc acaggtcgta tgctggaggc ttgagccgcg 000080
000081 gcaccgtggc gcggctcgcc tcgctgcggt tggtggtggc ggtggacatt gcagcgcggc tggaggggta ggaagaagaa 000160 000161 gatagttttg ggatagatag agGTGAGATA TTCCTGCACA TCCTCTGGTG ACCCCAGAAT GAGGGGGACT CGCTGGTGAA 000240 000241 TTGCCTCGGG CTTCACGTCC AGTACAGGCT GGGTCCCCGT GGTCGCCAAG CCTCCTGCCT GCTCAATGAT GTAGGCCACG 000320 000321 GGATTGCATT CATACAGGAG CCGGAGCTGT GGAGGAACAG AGGCAGGACA AATTCACCAA GAGCCTAGCA ACATGAAGAG 000400 000401 AGATGCCAGG AAGAAGAGAG AAGCCAGGAA ACAAGCCAAC CGCACAATCC CCACATCAGA GCAGGAGAAG ATGGGGGCCT 000480 000481 GCTGGCAGAG CTGGGGCTTG GCTGTGGTCA CTCTGAACCT GCTCTTTGGT GTTTTCATGA GTGGTGGGAA GAATAGGGAC 000560 000561 CATATGGAGC CCACACAGGA AGCTCTAGCA GTAACACAGC AAGCAGGAAG ACAATTCTAA GGAAGCAGCC CATAGTCTTC 000640 000641 TTTCTTTTCC TGTGCATCTT CCACTGTCAG TGAGGCTCCT CATTTATGGT GAACCCAACT GTGTGTATCT CCCAAGTTCT 000720 000721 CACCCGCAGA TTAATGTTTT CAGGAAGATA GGCCATCAAC AGTGAGAGGA AGAAGTTACA TTGTCGTATG AGGGATGCAT 000800 000801 TTTAACCATT AATTTGTGGT ACAggctggg cgcagtggct tatgcatgta atcccagcac tttgggaggc cgaggtggg |
Predicted Small Protein
Name | NONHSAT133326_smProtein_392:619 |
Length | 76 |
Molecular weight | 8521.6958 |
Aromaticity | 0.0666666666667 |
Instability index | 57.1026666667 |
Isoelectric point | 10.2756958008 |
Runs | 8 |
Runs residual | 0.0422695035461 |
Runs probability | 0.0291799152093 |
Amino acid sequence | MKRDARKKREARKQANRTIPTSEQEKMGACWQSWGLAVVTLNLLFGVFMSGGKNRDHMEP TQEALAVTQQAGRQF |
Secondary structure | LLLHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHEEELLLLLLLLLLH HHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |