NONHSAT133392
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT133392 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
8014 nt |
Genomic location |
chr9-:98568370..98638259 |
Exon number |
3 |
Exons |
98568370..98576204,98612509..98612574,98638147..98638259 |
Genome context |
|
Sequence |
000001 CAAGGTGGCT GGCCGGCAGG CCAATGGCGG CCAACGCCAC TTCCGGCCGC CCTCCGAGCA TCGCTCTTCG GCAACCCGAA 000080
000081 GCCACAGGAT GGAGGAGGGG GATCCCAGCA AAGATCCCAG TTTCTGACCT GTAGCATAGT CCCTCTCTCT GAAGAACTTC 000160 000161 CTGTAATATT TTTTGCTAGG AAGAGTTTGA AGTTTGAAAT CCCAGAATGA GGAAATTCAT CCAGCTTGGA GACTTCCAAT 000240 000241 CCCTTCATTG TGCAGAAGGT TGCTAATGCT CTCAGGAGAA GCCCTTCACC AAGAGAATAC TTCCACATAG AGTCCTCTCC 000320 000321 ATTGAGACTA AGGAAACATG CTATGTCATG TAGCCACAGC AGCCTTTGCA GCTGTTGAAG GCAGCAAGAC TTGCATGGCA 000400 000401 ATCAGAAGAC ACAGAACCAA GACTCATATC CAGTTATAAG ATGGCAGATG GGACACACAC TCATCAGGCT TAGTGAGCAG 000480 000481 CCAATCCAGA GGGAACCATA CTCAGCCCTA GGGGCTGGGC GCGGTGGCTC TCGCCTGTAA TCCCAGCACT TTGGGAGGCC 000560 000561 AAGGCGGATG GATCACCTGA GGTCACGAGT TCAAGACCAG CCTGACCAAC ATGGAGAAAT CCCATCTCTA CTAAAAATAC 000640 000641 AAAATTAGCT GGGCATGGTG GTGCATGCCT GTAATCCCAG TTACTCGGGA GGCTGAGGCA GGAGAATCAC TCGAACCCGA 000720 000721 GAGGCAGAGG TTGTGGTGAG CTGAGATTGT GCCATTGCAC TCCAGTCTGG GCAACAAGAG TGAAACTCTG TCTCAAAAAA 000800 000801 AAAAAAAAAA AAAAAAAGCC CTAGGAAGAT TTCTTCAAAC AGATGAAGCT AATGATATCC CCAGTGTGTT TGAATATATT 000880 000881 GAGAGATCAC ACAATAGGGA CACTGTTTAG GGTTGAATTA ATAGCAAGCA AATGGGATGC TAAGGAAATA TAAAGAATAA 000960 000961 AAGTTCAAAG GGAAAACAAA ATGTTATTCA AGAAAGTCAA AACATCCATC GTAACTTTTT TTTTTTTTGA GACAGAGTCT 001040 001041 CGCTCTGTCA CCCAGGTTGG AGTGCAGTGG CGTGATCTCA GCTCACTGCA AGCTCCGCCT CCCAGGCTCA CGCCATTCTC 001120 001121 CTGCCTCAGC CTCCCGAGTA GCTGGTACTA CAGGTGGCTG CCACCACGCC CGGCTAATTT TTTGTAATTT TAGTACAGAT 001200 001201 GGGGTTTCAC CGTGTTAGCC AGGATGGTCT CGATCTCCTG ACCTTGTGAT CTGCCTGCCT CAGGCTCCCA AAGTGCTGGG 001280 001281 ATTACAGGCG TGAGCCACCG CGCCTGGCTC GTACACTGTT TTATATACCA CTTGCAGTAT CATGATTGTA TAAATACTAA 001360 001361 ATATCTATTG ATCTATCCAA AACTACAACA TAAGTATTTT TGGAATATGG AGGAGTGGGT GCTGAGTATG CATGGGAGAA 001440 001441 GGGAGGCTGA GGTGAAGGTG GGAGAGAAGG AGACAGTGAA ATATTCATCT TCCAAATTGG AAACTCAAAT AGATAATGCC 001520 001521 TAAACATGAA ATATCAATAG AAATGTAATA TTTAAACATA TGGTGGTGCT TCTGGGAAAA AGAAAAGAGG ATGGAGAAGA 001600 001601 CTGTTTGTTT GTATGTTTGT TTGTTTAAAC AAGCAATATG GATGAAATTA CAGGCTAAGC TGCTTTAGCA AAAAGACACC 001680 001681 AAAATACAGA AGCTTAAATG AGGTAGGTAT AAGTTTCTCT GTTTGATATG ATCTCAAGAG AAGCAATCTG GGTTGGAAAG 001760 001761 TCACCTTTAT GATCCTCAAA ACGTAGCTTC CACCTGTGGG ACTAAGGCAG CCATTCTAGT TTTGTCTTCC CAGCCAGAGG 001840 001841 GAAGGAGGAC AGGGTCAGGA GAGCACATGT GCATAACTGA TAGGAACATG CCCCAGAAGG GCCACACATC CATCGGTCAG 001920 001921 GATGTGGGCA TAAGGACCAC AGCTGCATGG GAGGCTGGGA AGCATAGGGT CTAGCTGTTA GCCACGTGCT CAGCTAAGAC 002000 002001 ACTGGAGCCC TGATATTAAA GAAGGTGAGG AATGATGCTA GTGCTCAACC AGCAGTCTCT GTCACATCAG CTTTGCAGAA 002080 002081 TCATTTGATT CTTTCAACTA GGTGCATATA CAACTTCAAT ACAAATGAAA ACTAAATATA AGACATGGTT CTTAAAAATC 002160 002161 ATCTTTTGTA CAATTGAGGA CACAATCAAA ACCCAGACAC CAGGGTCCTG AAGCAGAATG CAGGCATCCA CAGAAGAGGC 002240 002241 GGTGCTGATG GACTGGACCC CAGAGAGTCC ACACCTGCTT GGTGCCATAC CTTGGGTCCC TCCAGATCAG GATGCTCCCA 002320 002321 GCAACTTTTC TAGGATGGTT ATACTGCACA TGCTGCAAAG ATGAGTGGGC ATCCCTGCAA GCCTATGGTT TTAGAGTAAA 002400 002401 TGGTTCCAAA AGAAGGTATG AAGCAGACCC ATAGATGGGG ATTAGTGCAT AGGAGGTTTA TTGGGGAGTA CTCTTGGGAT 002480 002481 CAACATCTGT GAGCAACGAG AAAGAAGCAG GATTGAGCAG GGAAGAAGGT GGGTGTTCTG GAGCTGAGAT CAAACTTCAG 002560 002561 AAGTGTTGTG GCAAGGGGGC CCAGTATTGG TGAGTCTTTC AATGTGACTG CTCCAAGAAC TCACAGCTTG GGGGTGTCAT 002640 002641 CTCAGGTGAA GTTGTTGTGT TCAGCCTGGG CAATTCTGGA GAGGCCTGAC AAGTGAGGCC TGCCCCTGCA GAACTCCTGG 002720 002721 CAGCTCAGGG AACACATTTT TCATTCCTGA GATGTTGCTT CACAGCATCT ACTCTGTGTG GATCCAAGGA GCTGCCTCTG 002800 002801 GGTCTCTGGG AAATCAGTCG TTTGAATTTG GATTCCAGCG TGTGGCTCTT ACATTTCTTT TTAGGAGAAA TCCAATAGTG 002880 002881 GTGCTCTCAT TATGATGACA GAGGGGCTGG GAGGTGCCAG GGGCCCAGCA GGGAAGTGGC AGGAGTACAG CAGCATACTG 002960 002961 TGTAACCTGG GCTAGGTTTT TACTCAAGGT GGCTTAGGAC AGCTTTTGAA GATTACAGGG AGAAGAACCT AAAATATAGG 003040 003041 CAAACCAGAT GATAACTACC CTGCTTTCAT CTGTGCCTCA GGGTGATTAG TCAGCATTTG TTGGTTAACA TGTCAAGAAC 003120 003121 CCTGTGATTT TGTCAAATAT ATATTTGGTC TTTGACTCCA TTTTCTGACA TACAACTCCT AAAATCCTTA TAATCTCCAA 003200 003201 AGTGATAGTG TCTTTTTGTA TGCTTATGAG TTGACTAGTG GCTGACAGCC TCTATGTAGC TTCAGGACAG GGACTGGTCA 003280 003281 CAGGAAAGAC CAAGGCAGCA TTAGAGGGTC GGGACTCTTA GCCCCCTACT CCCACCTCCA GGAACCAGAG AGGGTGGAAA 003360 003361 GGTTGTTGAC CACCAATGGC CAATGATGTA ATCAATCCTG CCTACAGAAT GAAGCCTCCA TAAAAACCCA AAAGGACAGG 003440 003441 GTTTGGAGAG CTTCTGCATA GCTGAACACA CGGAGCTTCC TAGAGGGTGG CACACCCGGA GAGGGCATGG AAGCTCCCTA 003520 003521 CCCCTTCCCC CGTATCTCCC TCTAAGCATC TCTTCATCTA TATCCTTTGT AATACCCTTT ATAATAAACC AGTAAACCTA 003600 003601 TGTTTCCCTG ACTTCTGTGA GCCACTCTAG TAAATTAATC AAACCCAAAG AGTGGGTGGT GGGAGCCCCA ATTTGAAGTC 003680 003681 AGTTGGGCAG ATGTTCCAGG GGCCCCAACT TGTGACTGGT GTCTGAAAGG GAGATCAGTT TAGGGTACTG AGCCCTTAAC 003760 003761 CTGTGGGATC TGAGGCCATC TACAGGTAGA TAGCCTCTGA ATTTTTTTTT TTTTTTTTTT GAGACAGAGT TTCACTCTGT 003840 003841 CGTCCAAGCT GGAGTGCAGT GGCTTGATCT TGGCTCACTG CAACCTCTGC CTTCCAGGTT CAAGCGATTC TCCTGCCTCA 003920 003921 GCCTCTCAAA TAGCAGGGAT TGCAGGTGCA TGCCATCACG CCTGACTAAG TTTTGTATTT TTTAGTAGAG ATAGAGTTTC 004000 004001 TCCATGTTGG CTAGGCTAGT CTCACACTCC TGGCCCCAAG CAATCCTCCC GCAAAGTGTT GGGATTACAG GCATGAGCCA 004080 004081 CAGAATTGAA TTGAATTAGA CACTCAGCTT GTGTCTTCTG CTTGGTGTCT GGGGAAACCC CCACATTTTG TCACTGAAGT 004160 004161 CTTCTGTGTT CACTATTTTT TTTTTTTTTT TTTTTACGTA AGAGCAGAGG AAAAACTGTG TGAGTTTAAG TAGTTGACTC 004240 004241 ACAAACCCTA ATCTTAATTT AGGTTCCAGA ATGGCCCAAG GCAAAGGTTT TAAATAGTCC TTCTCCATCT GCCCTAGAGG 004320 004321 GTTTATTTGT TATCACAGGG GTTGTTAGAA GGAAATTTTC TTTGAAGAAA TGAGTGATGC TAAGGCATGT AGTTGGCTGA 004400 004401 AGAGACTTCC ACTGGCACCT CCTCCCTTGA TCTGGCAAAC CCAGCAGCTG ACCACCTTTG GAGTGACAGA ATCTCTCTCT 004480 004481 CTTTATGGAT AGAATTCTGT CCTATGGTCC CCACCTAATG GAGAGCCACC TATGTCATCT CTGTCACCTA CTCTGATGTT 004560 004561 AAAATTTTGT TGTGACCACA ACAAAGTAAA TATTTCCTGC AAGATGCTTT CCAAAGTACC TAAAAAGACA AGAGAATGAG 004640 004641 AGGAGGAGGT TGCATGGCTA TTTTTGTACT TACCTCCCAA TAAATGTTCG TGTGTATGAG GCAGAATTTG GTCTGAGACT 004720 004721 TGCTTTCATT TAAAAACAAG TCCTGGTGAG GTAGTGGGAG GGAAAGGACC TAGACCTTCA CCTCCTTCTA ACTGCTAGAG 004800 004801 GCTACCAATA TTTTTTAAAA GAGCCTGATA TTTGTGAATG GCTAAATAAG CCCAGAGATT AAGAAAGTAA ATGATGCCTC 004880 004881 ATATTCTTGC TGGTTACATG TTCCAACAAT CTGAACAGTA AAGATACCTG AAAAAAATGA TTATCAACAC ATTGGTTTAG 004960 004961 TGCAGTGATT GATCATAAAA GATAAATGAT CCAGCTGTAG AAATTGGGAA TATGATATAT GATAATGATA GCAAGGCAAA 005040 005041 CCTAACCTGA TTATTCTAGA TATTCATTTG TCATTTACAT GGTGTCTGCT ACTGGACTTG GCTTTGGGCA GGCTCAGGTT 005120 005121 CTAGAAGAGT CTTTCATGCC CCCAGTGATC TGTGGCATGG CTATGGACAA TCCCTGGGTT TAACTCCTAT GTGTGAAAAA 005200 005201 TCTAGAGGAT TCTAGTGGCC GAACATACAG AAAAGTAAAT CCAAAATCTA ATCTTGCTTT GATTTATGTG GTTGGAAGCG 005280 005281 GGGAGGTTTG GGAAATGCAG TCAGACAAAA GTCATCCCAT CTAAATATTA AATGCAAGAG AATTAAAAGG AGACAGAGAA 005360 005361 TAGAAACCAC TGTCAATATG TTGCGAATCT GACAACTCTG GGATTAGACA TGATTTTCCC ATGTTCCCTC ACACAAACCC 005440 005441 TCCATTCAGG CCAGGCCTTT GCTCTTTCTA TCCCCAAGAG CTTGCCCACC AATTTACACC TTGGCTCATG AAACCTAGGT 005520 005521 TGCCCTCCTC TATTCACAAA CTCTCACCAC CCTTCAGCTA TCCCATCCTC ATGTATAAAA TGCCTCCCCA ACTCCTGTTA 005600 005601 GCCAGTGTTG ATCTCTTCCT GTAAACTCTG TTAACTTTGC CACTTATATA TTTCATACTT TTTCTTCTTG AGATTCTAAG 005680 005681 TCCCACAAAC ATTTACTGGG GCAGGCGGAC CTTGTAGTCT TGTGAGACTA TGGACAGATG AGGACTGTCC ATGGTTAGAC 005760 005761 ATGATTAGTG AACAATCCTA TACTGGGAAA ACACATGCTT AAATGGGACA ATACTGAAGT ATTATTTGCT GCATTCTGGA 005840 005841 CTTCTTCCCT TAATCTGCAT TTTTTTCTGG GCAAAAAGCC AGAATGGCCC AAGGCAAAGG TTTTAAATAG TTCCCAGGAA 005920 005921 GCCACATTCA GACTGCAAAG GCATCCTACT GAAGGGGCCA TGGTGTTCAG AAAGGTAGAT GTCCTCTGGG TCTTGCCCTG 006000 006001 ACCCCAAGCA CAAGGTCTTT CCCCTTCTGG AGTCCCTGCC GGGTCTCTGC TCAGACGTGG TCTGCCCTGC AGCTGTTGGG 006080 006081 CTGGGAGCTG GAGGGCAGGC AGGCAATGGG TGGAAATCAG GGGAACGTTT CTCTTCAAAA ACTGCTGTTT GAAGGCAGAA 006160 006161 ACCAGCTGTG CACCTTTCCT AAGGATTCAG GATGAGGATG TTGGGATTTG AGAAGATAGA AAGATCTAAG TCAAAAGCCA 006240 006241 TTTGAATAAG GTAGAAATAT CTTTCTCCTG AAAGGAGGCT AAACATAGAG ACATACCCCA AAGACATGAG AAAATGAGAG 006320 006321 TCTTTATACT TGGTGAAAAC AAGAAATGAA AGATGATGGA AAGATGCATG CAAATTATCT TCCAGCTTGC TCTTTTGAAG 006400 006401 ATGCTCGTCT AAAAATAAGA TCACGTGGAG GAGAAATGAC ATGTCTGGTG CTGAAAACAA CCCTACTGGG ACCAGGAGAT 006480 006481 GTGGAGCAAA ATGTATTCAG AAAGAGACTT TGCTCTGGAA ACCATTGCTC ACTGCCCTGC TGCCAAGGTC ACAGAGAGCT 006560 006561 GGAGCTTTGC TGCTGCAAAG CTGTTTACAT ACAAGGATAC ACAGGAACGA AAGGTCATGG GAGGTACTTG AGCCTGGAGT 006640 006641 CTCCAAAGTC AAAAGACAAT AAACACACCA ACTTTCAGGG CTTTTAACAA GCACAATCGG GCCAAACAAA TTCTCACTTT 006720 006721 GGATGTAGAT CCACAACATC TTGCAGCAGA CGGAAATAGG ACTGGGGCAA GAGTTGGTAC AAACAGAAAT ACTAAGTTTA 006800 006801 TCACGACCAA AATAGGCAAT GGAGGGTAAA AGCCCGCAAC CTACTTCAAA TATATCTGAA CTGGTGTTAA AACTAAGCTA 006880 006881 GCATTGAAGA GAGGGATAAA ATTCAGGAGC AAGTTTCCAA AGAGACTCAT AAGAACCCAG AGAGAGGAAA ATCTTTTTCA 006960 006961 GAAAATTCAT AAAAGTTAAT GAGTCGCCAT TCTGATGTAA CGGAGAGAAC TTCAGTAATA TGACCAGTGA TGGAGTTGGT 007040 007041 GTGAAATGCA TAGACTCCAC TATGACCTGA CCGGGTATTT CCTCAGCAAA TATTTGGGTA TATTTAATTG AAATGCATTT 007120 007121 GTGGCAAAAG TCAACTCCTA CAAAAAAATT GTTAAAATAT TCTTCCTGGA AGTTGTCTCC CAAAGTGACT CACATCAAGT 007200 007201 AGTCTGAATA AATATGGTGA GACTTGGCAC CCTCTGAGGC ATCATTTGCT AGGAAGAAAA TGCTTTTGAA TATCCTAGAA 007280 007281 CTCTTGGAAA ACTTACAGAA CCATTGGCCT CATGCAAGCC CATTGTCCCT GTCCAACACA CCCCCACATC CCCTTTCCCT 007360 007361 CACCATCAGG CACGAAAGTC CTTCCTAAGT CGCAAATGCA AATCTAACTG ACTGGCTTCC TTCTTACAGA CCAACCACAG 007440 007441 CTACTTGTCT TTGAAATTCA ACTTCAAGGA AGACAGAAAA GTCTATTTTT AATCAGAGAA AAACCTCAAA TTGAGTGCGA 007520 007521 ATTACTGCCT AGGCCCTGTT GAATGCACAC TAGAATCACT TTTGAGATGA TCACTAATTT TATGGAGTGA TATACACCAG 007600 007601 AATGAACTTC TAGCCTGCTT TATAATCAAT CAGTTAATCA ACAAGTCTGA GTGGAGCGTG TATGCTTTGC GTTATCTGCA 007680 007681 GTGCGGCCTG AGGTTACGGG AGAAAAAAAT GGCACTGTGT ATTGCTTGAA TGCTCAGGGC TGCGTTCAAC TAATTTTAAC 007760 007761 CATTGAATCA AAATGATCAG GTAGAGGGCA GGAAATGTAG AATGGCTTGA ACAACTACCT CATGAAAACA TGCAGTATGC 007840 007841 GTTTGTAATT CAGCATCTTA AAATGTCTCT TTTGGCAGTA TTTCTTTACA AATGTGGCAA AGCATGATAT CTTTGAGTAA 007920 007921 ATTTTTAAAC TTCACAAAAG TTTCTGAAAA AAATATGTAC AATCAAAGAA AAACACTTGG AAATAAATTC TGTCTATAGT 008000 008001 TTATGCACAT TTAA |
Predicted Small Protein
Name | NONHSAT133392_smProtein_6440:6661 |
Length | 74 |
Molecular weight | 8234.5347 |
Aromaticity | 0.027397260274 |
Instability index | 64.1342465753 |
Isoelectric point | 10.5170288086 |
Runs | 13 |
Runs residual | 0.0339372514361 |
Runs probability | 0.0285624991508 |
Amino acid sequence | MSGAENNPTGTRRCGAKCIQKETLLWKPLLTALLPRSQRAGALLLQSCLHTRIHRNERSW EVLEPGVSKVKRQ |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHHLLLHHHHHLLLHHHHHHHHHHHHHHLLEEELLLLLE EEELLLLEEELLL |
PRMN | - |
PiMo | - |