NONHSAT133470
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133470 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1012 nt |
Genomic location |
chr9-:99890338..99892015 |
Exon number |
2 |
Exons |
99890338..99890362,99891029..99892015 |
Genome context |
|
Sequence |
000001 AAAAAagaat atattttcta aaagttgcta caattcaata ataaaaagac taatatccaa attttaaaat gtataaaagc 000080
000081 tttgaactga caatttacaa aataagatat atggcagatc agcacattag aagatgccca gcatcattaa tcatcaagga 000160 000161 agtgcagatc aaaatcgccc cctgacctac cagaattgct aaaatgaaac aggctaatca ctactaatgc aacagcaact 000240 000241 ctcatacact accgtatggt gtaaagtgat acaaccattt tggaaaactg tttgcaagtt tcttaaaaca tttatacata 000320 000321 cctcttccac ttaaccacag catctacaga aatgaaaaca catgtccaca aaaagccttg cacaaaagtg tttacagcag 000400 000401 ccccaaacta gaagcaaccc aaatgtccat ctactgggaa gtgcataacc aaactgtagt acatgcatgc aaCTGTCTtc 000480 000481 tgcttccagg ctaagttctt tgcttttaag ggcttctggg attagattgg acccacccag ataattccag ataatcttac 000560 000561 tttcagTCCC ACACCACCTC AGCCCTCCTG CTCTTCAGAG CTCAGTGCAC AGGGCTCATT TCCTCTCGGA TGACCTTCTC 000640 000641 CGCTAAGTCC ATTTATACAG GGTTCCCTTC TTGTGCAGAA CTAGGCCAGC TTCCCACATG TTCCAGGGCA AACTCACTTT 000720 000721 GAGCAGGCTG TGTGTGTGTG TGTGTGTTCC CGGCTTTCTG CTATAAATTG AAGATTGTGG AGGGCAGGGA CTATGTCTTT 000800 000801 TTCTTCTTTT TGCCCTCCAC TTAGCCCCTT GACTTTTTGC CCTCCACTTA GTCCCTCACA CAGTGCAGCT TAGTGGAGAA 000880 000881 GCACATGGCC TGTAGAATCA GATGGAACCA TGTGAGGTTT GGGACCACAA GTGGATACAC AAAACAGGAA TCCTCTCCAA 000960 000961 TAAGGATACC CTTGAGCCAA CCACTGGagt caaagtctca ccatgttgcc ca |
Predicted Small Protein
Name | NONHSAT133470_smProtein_68:184 |
Length | 39 |
Molecular weight | 4568.475 |
Aromaticity | 0.105263157895 |
Instability index | 59.4657894737 |
Isoelectric point | 9.65277099609 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0231407878467 |
Amino acid sequence | MYKSFELTIYKIRYMADQHIRRCPASLIIKEVQIKIAP |
Secondary structure | LLLLEEEEHHHHHHHHHHHHHHLLLLHHHHHHHHHHLL |
PRMN | - |
PiMo | - |