NONHSAT133488
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133488 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1370 nt |
Genomic location |
chr9-:99957620..99958989 |
Exon number |
1 |
Exons |
99957620..99958989 |
Genome context |
|
Sequence |
000001 GGCTTTTTTT ATTTTGAGTA TCCTAACTCC AAACCTAGTG TTCTTTTCAC TCCATTATCC TGCTGTTTAT AGCAAATCAA 000080
000081 GACCCATAAT GATACGTCTT TCATTTATTT CAGTTCTGCC AAGGAAAGAG AAAATACCTT TTAATCCCAG GGAAAGGATT 000160 000161 GCAATCACCA CATTATAAGG TATATGGCGT GGAATGCAGA ATTCTAAATA CTAGAAGGGA AAAGTAGTTG GCAGATTCAT 000240 000241 CAGAGGCTTA AGGATAAGTA CTTGTTTCCA ATTTAAAAGT ATAATTAGGA TTGTCTTTAA TGTTCTCTAG AAATACTATA 000320 000321 ATTAATCTAG AGATCTATCA ATGGTCACAT CTCAGTTTTT TTCTTCCCTG AGATTCAAAG ACGTGTAATA CCAATACTTC 000400 000401 AGATTCCTAT AGTATTTGGG ACTTTGTAGA CTAGTGAATA GATACTTTGT TGCTAGTCCA AATCCTCTGA TTTTGGTTTG 000480 000481 ATTTGTCCTA GCAGATCCCT GAACTTCAGA GAGTATTGCC ATTTGGATTC ATGGAGTTGG CGAACTGCTA CACTGCTACC 000560 000561 TTGTGTATGG CTCTAAGCTT TGATCCTAAT GACTGGTTGA TGATCATGAT AATATTAGGG CCAGTGAATA TAGCTCATAG 000640 000641 TGATAATAAG GATTCTAGGG TATTTTTTTT TTCTTTTAGA AAAAGATCCT GGAAGTTTAT TTGATCTGAC ATGTTTTTGT 000720 000721 AATATTTAGA AATAGCTCTT GTATCATAAA AAGTTGCCCA GTATAAGACA CACAAGATGT ATTTTTTTCT CTGGTGAAAA 000800 000801 TCATGCCTAT CACTAGTATA TGTTTGACAT TTGTAGTATA CTTAAAATAG TATTGGGTGT GAGGCATGGT GGTGATGAAA 000880 000881 AGTAGTCCTT ACGGCTACTT GTTAGTCATT AGAGAGAACA TGGAGAAGGG GTCAAAGTTG GTATCATTAA CAGGGCAATG 000960 000961 ACTTGACCCT TCTTTCAACT GATCTTACTG GTAGTTGTCT CTAGTTTTTA AGTAAATTAA TGATGGACCA TCCCCCAAAC 001040 001041 AGAGAACTAT GGGGGTATGA AACAAGGCTG AAGGCTTTTA ACCATGGGAG AAAAAGGTGT TGGTATTATT CATATAGCAT 001120 001121 AACCTGAGGT TGGAGAGGAC CACTTGGGAG CCTGTAACCA AAACTAGAAG GTAACTTCTG GGATGGACGG AGGTTCCCTT 001200 001201 GAAGCAGTGC CAACCTAAAT CTACCTCAGG TAAGTAGTTA GATTAACTTT TTCAAGATTT CAGACCAAAC AAGACAACTT 001280 001281 GTATTCAGTT GATGTATTCC TATGCTTTAA TGTTTTTGTT TGCCCTTAAT TATTAAATAA ACATTTGTTC TGAAAAAAAA 001360 001361 AAAAAAAAAA |
Predicted Small Protein
Name | NONHSAT133488_smProtein_530:703 |
Length | 58 |
Molecular weight | 6706.8338 |
Aromaticity | 0.157894736842 |
Instability index | 57.3614035088 |
Isoelectric point | 7.81439208984 |
Runs | 11 |
Runs residual | 0.0390350877193 |
Runs probability | 0.0446516034751 |
Amino acid sequence | MELANCYTATLCMALSFDPNDWLMIMIILGPVNIAHSDNKDSRVFFFSFRKRSWKFI |
Secondary structure | LLHHHHHHHHHHHHHLLLLLHHHHHHHHHLLLLEEELLLLLLEEEEEEEEEELEEEL |
PRMN | - |
PiMo | - |