NONHSAT133938

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT133938

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2753 nt

Genomic location

chr9-:111892575..111895301

Exon number

1

Exons

111892575..111895301

Genome context

Sequence
000001 TTCTGGAATT AAGTTTACTG TCTATATTCA GGATTTTGTG CATAAGAGAC GTGACCACTG AGGTTGTGTG TCATTCTTAT 000080
000081 CTCTACTCCA GGGGTCAGCA AACTTTCTCT GTTAAGGGTC AGATAGTAGT TTTTTGGCTT TTCAGTCTCT GTTTGGCTCT 000160
000161 GCTATAAACA ATACATAAAT GAATGAGCAT GGCTATGTTC CAATAAAACT TAATTGACAC TGAACTTTGA ATTTCATGTA 000240
000241 CTTTTCAAAT GTCACAAATG TTTTCCTTTT GATTTTTTTC AGAAAGCCAT TAAAAAAATC CAAAGACCAT TCTTAGCTTG 000320
000321 CAGGCTGCAC AAAAACAGGA AGCAGGCGGG GTTTGCTTAT GGACTGTGGC TTTCCCACCC TTGTTCTTAG ATAGGGACAC 000400
000401 ACCAATATAT CATGATTAGT TGTAAAGGAT ACTGCCAGTA ACATATTATT ACTGGTTAGT TGTAAGAATA TCAAAGTTAG 000480
000481 TGAATAATTT GCTTTTAAAA TAAATTATTG TTGATTTATT TTTATAAATA AATGGCACAG GGCATCTCAT GCTCTTGCAT 000560
000561 TCTAATATAT TTTCTGGAAT TGATGCAAAA GTGGTGGCAG TAAAGTACAG AGCCGGCTAA GCAGCAGTTT TGTCTTAAGT 000640
000641 AACTGTGGTG ATCATGGACA ACCATTGCGC TGAACTGCTC TTCATGGTAA GGATTTCAGT GTTTCAGAGT AATTCATTAA 000720
000721 CCTAGAGATG TTTTAAAAAG TTGTATCGGC CGGGCGCGGT GGCTCAAGCC TGTAATCCCA GCACTTCGGG AGGCCGAGGT 000800
000801 GGGCGGATCA CGAGATCAGG AGATCGAGAC CATCCTGGCT GACACGGTGA AACCCCGTCT CTACTAAAAA TACAAAAAAA 000880
000881 ATTGGCTGGG CGTGGTGGCG GGAGCCTGTG GTCCCAGCTA CCCAGGAGGC TGAGGCAAGA GAATGGCGTG AACCCGGGAG 000960
000961 GTGGAGCTTT CAATGAGCCG AGATTGCCCC TCTGCACTCC AGCCTGGGTA ACAGAGCAAG ATTCCGTCTA AAAAATAAAT 001040
001041 AAAATAAAAT AAAATAAAAT AAAATAAAAT AAAATAAAAG TTGTATCAAA ATCTGCTGCA CCATGGGAGT GTTTTACACA 001120
001121 TGTGATGTGG CATCTACCTT ATGTACCATA ATGGAAAAAT GTTTGAGAAC CACTGCACTA GGCCAAAGGC TGGGATGTGT 001200
001201 ATACTTTGCT GCCGTGTATA ATTGTATGTC CTTGTTCTCT AAATGGAATT GGTTATGTTT AGTGAACAGT TAGGTGGTTC 001280
001281 TCCGTGTGTT TATATACACA GACGATCCCC GAATTTGGAT GGTTCAACTT AAGAGTTTTC AAACTTACGA TGATATGAAA 001360
001361 GTGATATACA TTTGATACAT TCCTACAACT TACAATGGGG TTATGTCCCA TAATTGTTTT GACTTATGAT ATTTTCAACT 001440
001441 TACAATTGAT GGGTTTACTG AGACATAACC CTCTTGTAAC TTGAGGAGCA TGTGTATATT TGTACATACA TGATGGTGTG 001520
001521 TGTTTATACA CAAAGGCCTG AATATACACA CCATGAGCAT TTGAAGGTCT TTGTCAAGGT TGTTTCTGTT TCTGATCTCT 001600
001601 TGCCTACTTT AAAACCCAAG AGGTAGAACA TTATGCATAT TACAGGCAAA ACTATGCTTG AGTTTATAGC AATGTAGTTT 001680
001681 GTAGAAAGGA TTCCTGGATG TTTTACTAAG CCTTTCCTCC TCCATTCAAC ATTATATGAA TTGTTAAGAA CATATAAAGT 001760
001761 ACCACTGTTG AATGTGACTT TTCTATACTG TTAGTTAAGA AACCAAGACT AGTGTTAGCT GAGTAACTGG CATGTTGATG 001840
001841 CAACCTATAC AGGTTTTGTA TTTAATTAGG TTCCTTATTC AGTTATTCAA GTATCCAGTT ATTTAGTTTC AAGGTAGATT 001920
001921 TCTTTGTTTT TATATTTAAT AAAAGACTTG CATATAAGTT CCTCTTCATG AAAATAGTGG CTAGGCTAGT GTGATTTTAA 002000
002001 GTATGTCTGG CAACTCAAAA TGTAATGGAT TCATCAAGCT ATTTGGGATT TTTAACATAA AACACACTGC TGCTTGATTA 002080
002081 ATGTGTTCAG TTTTCCCCTG GATATTTGCT ATTAGGCTGA TAGCCATTTG GTTGGATTCT TCTGGAGAGT AATTGATTCT 002160
002161 CTAAGGTAAT GGGGTGCTGC AGTGGGTGTA GCATTCACCC AGGTCACTAG AATCCTACCT GTTTCATCAC ATAGAAGGCC 002240
002241 CTGGCCATGG GGAAGAGTGA ATGCAGCTTC TCCGGATGCC TTATTTCCAC AGACATGCTG ATATGCTGGA ACAGTCTGGC 002320
002321 TCCAGGAGTA TTAATATACT TTTTTGAGAC TGTCTACAAA ATCCTATTTT GTAAAAACTA TGCCTTTACA TAGACATTGA 002400
002401 TAGGTTATAT TTGTTTTATA ACAATTGTGT ACCTAATGTT TGTGATTAAT TTTGAGATTT ATGTATATTT ATAAGCCTAT 002480
002481 CTTATGTAAA TTTTTACTCT AAGATGTGTG GCACATTACT AATAAAGACG TGGATTTCTA TTTATGTAAA GTAATTGTAG 002560
002561 CAATATTCCT AGATGCTACC TAAATGATTG TTCTGTCCAT TTGCCATCAC AAATACTTTT ATCTTTGGAT GATTATGTTA 002640
002641 GTCAGAATAT ATTAATTAGA TTTAAACTTT AAAATAAGAA TTACAACATA GTTTGAAATT CTTCCTGTTG AAGTAATTAA 002720
002721 AGTTAGTTTA TAATTCCTAA AAAAAAAAAA AAA
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Predicted Small Protein

Name NONHSAT133938_smProtein_2246:2392
Length 49
Molecular weight 5456.4184
Aromaticity 0.1875
Instability index 42.325
Isoelectric point 5.92694091797
Runs 8
Runs residual 0.00109649122807
Runs probability 0.0638910969794
Amino acid sequence MGKSECSFSGCLISTDMLICWNSLAPGVLIYFFETVYKILFCKNYAFT
Secondary structure LLLLLLLLLLEEELHHHHHHHHHLLLLLEEEHHHHHHHHHHHHLLLLL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo oooooooooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiiii