NONHSAT134373

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT134373

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3991 nt

Genomic location

chr9+:117031087..117036510

Exon number

2

Exons

117031087..117031574,117033008..117036510

Genome context

Sequence
000001 atgcctgtgg tcccagctac ttgagaggct aaggtgggag gatcacttga gcctgggaga tcaaggctgc agtgagctgt 000080
000081 gattacccca ctgcactcca gtctgggcga cagaatgaga ccctgtttca aaaaacaaac aaaaaaagtc cttagaacag 000160
000161 tacagaacag tacagttagt tattaatagg atgatggtGT TGGTGCTAAT TGTCCTCCTG TCCTGGCGTG GGAGAAGAAG 000240
000241 TCCGTGGACA AGGCTTACTT GGAACAGGAG CTCTGGTTGG TGTTTTACGA TTTCTCTGTG GTCCCTGGGA AGAAGGACCT 000320
000321 TCCCCAGCTC CTCCTCCCAC ACCCCAAAGT CAGAGCTGGT GGAAACAGGA AGGGGTGTCG AGAGCTGGGG CTGGCCCTAC 000400
000401 CCACCCGCAA GGACTTTTGT TCGGCTTCTC CTAGGGTGAC CTTGGACCCC TGGGCACTCC TGGGGAGCAG GGCCTCATTG 000480
000481 GGCAACGGGG AGAGCCAGGC CTTGAGGGTG ACAGTGGCCC CATGGGACCT GATGGGCTGA AGGTAAGTGC CCTTTTAGGG 000560
000561 CAGGGCCTGG GGACCCCGGC AGGGCATTGC TTTCCCATCC AAGACCTAAG TCTCCTCCCA GAAACACTGT GTTCCCATAG 000640
000641 AGATCTGAGA TGACAGCTCC AGCTCCCATT GACAGCAGCT TGGGGAAGGG TCAGCAGTGT CCAGCAGCCA CCTCCCACCC 000720
000721 TGCCCTCTGC ACTACCTGCT CAGGTGGGAC CAGGGCCATC ACCACCTTCC AGTCTTTCCT GCTACCCTTC TTAAAATATC 000800
000801 AGCTTCTCTT GGCTAAGGGT GATTCCTGAG CACCGGCACT ACGCCAGGCC CAGAGCCAGA GTCTTTGGTC TCTGTTATCT 000880
000881 TCCAAATATT CTAGAAGGTC AGGAAAATAA TAATTACCAC CAATGACTTA TAagccacaa tttagggagg actagtcaca 000960
000961 cacataccag gtacaacgct aagcccttta ccagctggat ccataggaca acggaagttc tgtctttaga tgaggaaact 001040
001041 gagactcaga gtggtgaagc aacttgccca aggacacacc gctagcaact ggcacatcca ggacccaaat ctgggcccgt 001120
001121 ttggctccaa agcctctgct cactctgctg taccatgcac ccattctaaa ggcgaagagg ctgaggctca gaggaaggca 001200
001201 tagatacatt caggacctat ggctatgagt gaggatccaa aattcaaacc cacggctcac aggtgccaaa gcctgctggc 001280
001281 ccaacttgac cctgctgctc cCTGAGAGAC TCCTGTCAGC CACAAATGTC AGGACTCTGA AGAGACACCT TAGCTCACCT 001360
001361 GAATTGCAGG TGGGCAGGCG GGCACCTCCC TCTGACTCTC CAGACCCATC TCCAGGCCAG TCCCTGGCCT CCGTCTTGGG 001440
001441 CCCCGCTCTG ACCCCACAGG TGGGCTTTCC CCGAGGCTGG CCGGTCACCC TGTGCAAGTC AGCTCCCCAG CCCAGGTTCC 001520
001521 TAAGGGCCAT GCCCTctcgc ccacctactc tccaggtgac ctcagagaag cagacccctt ctctgaacct cagtttcccc 001600
001601 atcCACAGGC TTCCGCCCAC CCTCGTTACC CCCTCCCCAC AGTCTCCCAG GGTGCCTTGG CGACCGGCCC CTGCTGACTC 001680
001681 CTCACATTTT CTTGCAAGAG CGAGAGCACC CCCTGTCTGT CATCTGCCTG ACTCCTCTCC CCCAACCCTG CTGCATCCAA 001760
001761 GCGTACAGCC GAGTCCCAAG ACCCGGAGCA TTTGACAGCT GCTCCACACC CTTTGCCAGT GCCTGCTACA CTGGGTGGTG 001840
001841 ATGCTGATGA AGGTCatggc taaaatgctt tgggcacttg ccatgtgccc agtgccaccc acccaaaggg ctttatgtga 001920
001921 attaacccat ttaataatta atgttcccag caactctccc aagcttgata cattaccatc ctcactagac ggatgaggaa 002000
002001 actgaggcac gaagCAGCAG CCTTCTCACT CCACTCTGGG CGGCCACCTT TCTTCTTGGA AAGTCCACTG AGGTGGGCGG 002080
002081 GAGGGGGTCT TCCAGCCTGG GTGCCTCATG CAGTCTTCTG CCTCCACCTT GCATGGCTTT TTGGCCCTGA CTTCATCCTC 002160
002161 TTCCCCTCCC TTCAAAGCCA ATTCTACCTG AGTCCTTGTG CTCAAATGCA CAGCATCTTC CCTGGTCTTT ACATGAATCC 002240
002241 CAGGAGAGAC CCATTTTCTT AAGGTGTTTG TCCAGGAATC ACCCCTCATG GTGAAAACTG CGTCTCGAat atgcacagca 002320
002321 cttcatagtt tatagagtgc ttttacaccc gttatctcTT CGCTGATGTC CAGCTGACAG TGATGATGGT GGTGGTGACC 002400
002401 aataatagtt agcttttatc cagcattcac atgccagaca cactgctaag ctatttacat ggtttatctc tttcaatcct 002480
002481 tgcagtaatc ctttgatcct gattttacaa acgaggaaac ttgcccaggg tcacacaact attcagtagc ggtagcaaga 002560
002561 tttgaactta ggcagcataa cccgagggtT GAGGGAGGCA TCGTCCCctg agcagagaat cttggaatta gaaggagcca 002640
002641 gaaccccagg ttcacacagc actgactcac tcggtggtat tagggagtct ccacctgtct gcacttcagt tgtcccatct 002720
002721 gtaactgaag agggttaagg aaggtgactt gcaaggctcc tctgagcact ggcaGATGTC TGAGGATTTG GGGCATCTCT 002800
002801 AGGAACCCCC AGAGACTGTT CTGCATGAGA TTCACAAGGA CGCCCACCCC AGGGGTCCAG TTAGCCCCTG GAGTGTGGTC 002880
002881 TTAGGCAGAG CCCAGGTGAG GGCCCTTTGT TGAAAACCCG ACTAGCCACC TGGAACAGGC TGTCTGCCTC TGAGAGGAGA 002960
002961 ACAGGTGGCC AGGACGACAA GCCAGAAATG GAATCCCAGA GCCAGAGGAG TCTGCAGGAG AGTTATTCAG GCCAGCCCCC 003040
003041 TGTCTTCATG CCAGGCTGTG CTTAGAAGCT GAGGCTCCCA GCAGGAAGGG ATCCGGGCAC AACTTTGTGC CCAGATCTGC 003120
003121 TCTACATTGG CCCACGCCTC AGCTCGGAGT CTTCTGCCTT TATCTGTGCC ATCTCTGGAC CGCTCCATTG GAAAATCTTC 003200
003201 CCAACTGAAC TAGAAACTGC CCCAGCAACT CCCTCACACC CACCTCCTGC CCCAGAGCTC AGGCCTCAGC AGGCCCAGCT 003280
003281 TGAAGCAATG AGCAATCATG AGTTGCTTTC TTGAGCCTCT CTTCTAGGCA GGGCCAAGCC CCAGGCTCCA GCttcatgcc 003360
003361 ctctgcttcc tgtgctctct ctcctctgga tgcacaccag tttatcagtg tccctcgtaa accttggcac tgggggacag 003440
003441 aactgGTAAA GACACACTAT GCTTTTCCAA GCCTGCTCTT CTCGCCCATC CCTTCCTGAT GGACGCCGCC CCTCAGCAGC 003520
003521 CATGCCCGTG CTGCACTCCA CACCTGCTCT GCTCACGGTG ATGAGGGTGA CAGCCCACGC CCCATCCTGG AATCCTGCAT 003600
003601 GCCCCATCCT GGAACCCCAC CTGCCCCCAA TCTCTCTCAG AGTACGCAAA GATTACCGTG ATGAGATAAG GCAAGCTTAG 003680
003681 AGTGACACTG ATTGCTTCAA AACCATAAAA AGCCCATGCC Agcctggtgc agtggctcac acctgtaatc ccagcacttt 003760
003761 ggaaggccaa agtgagtgga tcatctgagg tcaggagttc gagaccagcc tagccaacat ggtgaaaccc tgtctctact 003840
003841 aaaaatacaa aaattagcca ggcatggtgg cgcgtgcctg cagtcccagc tagttgggag gcgggggcac ttgaacctgg 003920
003921 gaggtggagg ttgcagtgag ttgagatcat gccactgcac tccagcctgg gcaacagaat gagatccgtc t
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Predicted Small Protein

Name NONHSAT134373_smProtein_3458:3679
Length 74
Molecular weight 8125.4251
Aromaticity 0.041095890411
Instability index 83.1219178082
Isoelectric point 10.0609741211
Runs 9
Runs residual 0.0208572691118
Runs probability 0.0248189365836
Amino acid sequence MLFQACSSRPSLPDGRRPSAAMPVLHSTPALLTVMRVTAHAPSWNPACPILEPHLPPISL
RVRKDYRDEIRQA
Secondary structure LLEEELLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLH
HHLHHHHHHHHHL
PRMN -
PiMo -