NONHSAT134532

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT134532

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2627 nt

Genomic location

chr9+:123609572..123616080

Exon number

2

Exons

123609572..123609633,123613516..123616080

Genome context

Sequence
000001 GGCCATGCTG GATAAGGAGC TGGCTGCCTC TGTGAACATC CTACTCAAGG CATCTTCACT GTGCTGTACA TCCTTTTGAA 000080
000081 ATCCCAGAGA TCTTCAGTCT CCCTGTGGAT TAAGGAGATG TGCAGTATTT AAAGTGGCTT CAGGAAGGCA TGGAAGAGGA 000160
000161 CTGAGTGGGG AAAGCTTTTT GTGCATGCTG CTGGCTACCT CCAGCGGCTG CCTCCAGCCT CCATCAGCTG CACTCTGGGG 000240
000241 AAGAGGAGGC TGCCTTCTAC CTCCCAGCAT CTCTGGATTT CATGTTCCTG TCAGCACAGA GGAGCTAAAT GGCCTGTAGA 000320
000321 GGCTGAAGGT CTGAGGCTCC TAAAGCTGGA AGAAAAGGCT GGGCCAGTCA GGCCAAGCAA GAACACAGTG TAACTTGTCT 000400
000401 CTGAGTGCTT CATGGTTAAG GGGGCTAAGC AGGCACAAGG GCATGAGGAT GGTTATATGT ACAGACTGAG GGGAAGAAGC 000480
000481 AGTGAAGATG AGACTTGCCA TCTTCTTGAG TCAGTAGGCC TGCCTCAGGT GCCTAGGATG TAATTGCTCT GCTGCTTCTC 000560
000561 ATGGGGAGGA GTGGCCCTCA TGACCTTGTT TACCTGGAAG AGTGTGGGAT GAATGCCTCC TCCTATGGGG ACTCGCAAGT 000640
000641 GCTTTAGCAA AAGGATAAAT TGCTAATTGT GGCATTTCGT GGATCAGCAG GATTATTTCT CCTTGCTAAA GAGGATTTTG 000720
000721 TTGGTCCTGA ATTCTGAGGA GGTGGGACTA GGAATGGGCT CCATGAGCCT GTGTATGACT CAGGGAATAT TAGGACTTTG 000800
000801 GCACAGCCTC ATGGGTTGGG AGTAAGTCTT GGCTCTTCCC TAGCCTGAAT GACAGACATC AGATCATTCT GGTGCTTTGT 000880
000881 CCATGAAGAT GTAGATTCTG AGCCCACCCA ACTAATCTTT TCACTTGAGC ACAGAAACAG CCCCGGGAAT CGGACAGACC 000960
000961 CGTGTCTTTC AGGTTTGCTT CACAGAGCCC CAGGGGTTGA CAATAGGTGC CTTGGAGACT GCCTGCATGG GGATTTTTAA 001040
001041 AAAGCTTTCT TTGTTAAAGG TTTGTAAACC ACTCCTCTGA GCCTGTTTTC ATTTTATAGA TTATTCAGGG AACTGAACTG 001120
001121 CACAGAGATC CAGAAAGTGG GTAGTGCAGG CTGTAGTGCT GATAACTACT GTACTACTTG GATCTTTGTG CTCCCAAATA 001200
001201 CCAAATGGAA GAGGATCTCT GAGAGTCCTT TGCAAAGATC TTGTAGGGAC TTTAGGCTGG GGCCTTCGGA AAATTCCAGA 001280
001281 GGATTCCAAT GGAGATTTTG AGGGACTGAC TCAGAAGAAC AAAGAGAATG ATAATGGTGA TGTCCCTGCT TTTTACAACA 001360
001361 GATCATGTTC TGATATATAT GCAAATCTGT GTAAAGTAAA CCCTACCTAA AATGTACTGG GGACCCAAGA TGGACTGCCT 001440
001441 GTATTGCTTC CAGGATAAAG TCCAATTTCT AGCTCTGGTT TTTATAACCT TGCTTCAGCT CACCTTTTCC GTCATCATCC 001520
001521 CCTCCATCTC CTCTCCCACG CTGGGAAATG GATGGCTGCA CTATACTGTG TGATGTTATT GCTATGTTCA TGCCATCCCC 001600
001601 TCTGCCTGGA ATGCCCTTCT GCATGAATGC CTGTGAAATG TTGTTGCTCC TTTGTATGGC CTGGCTTCCG TGGTTGGCAG 001680
001681 GAATCTCTTC TTTCGTGGTA TTCCTGTCAT CTTTGTGCAT CACAGTCAGC TTTGTATTCC TAGCTTGTAA GCTACTTGAG 001760
001761 GATAGGGGCA TGTCTGAATC TATTTAATCT CTTGCACCTG TTTGGCAAAT TGATGTTTTA AGTATTTAAA TAACTAAAGC 001840
001841 TCTCTCTACA GTACATACTC ACTTTTGATT TATGAATTGG CAAAATTCAA CTTTTTTCCT TGAATATTCT TAAAGTGAGA 001920
001921 TGAATTCCAA AGGAGAGTGT TCTGTGTGTG GCCTTCATTG AGTGGTTTTC TGTTACCAGA AAGCTCTTGG TGGCCTTCCT 002000
002001 CTTCCCTGGT GTCAAGGTTG ACTGTTATAG GAAATGGGAG GGGAGAGGGC CGTTTCTGCC ACGCATTGTC CTAGGTTCTT 002080
002081 AACATTATTT AATCCTTATA ATGCAATGTT ATCCTCATTT TACAGATGAA ACCTGAGACC AAAGAACATG TAACACATAA 002160
002161 AGTACATTGC AGAGTTAGGA TGTGAACCCA ACTCTGATTC TAAACCTAAT GCTCTCACTC TTTCATTCAG AGGTTCAGTC 002240
002241 AGTTCTTTGT AGGCTGTAGA TCCAGAGAAG CTGCCGTAGC CAACAATGAA GTTGTTAGTT TTTAAAACAT CTATGTGGTA 002320
002321 AGTTGGTCTG GCACTTAAAA ATGTATTGTT TCCCAGGCAC GGTGGTTCAC ACCTGTAATC CCAGCATTTT GGGAGGCCGA 002400
002401 GGCAGGCGGA TCATTAGGTC AAAAGATTGA GACCATCCTG ACCAACATGG TGAAACCCCG TCTCTACTAA AAGTACAAAA 002480
002481 ATTAGCTGGG TGTGGTGGCG CATGCCTCTA GTCCCAGCTA CCTGGGAGGC TGAGGCAGGA GAATTGCTTG AACCCAGGAG 002560
002561 GCAGAGGTTG CAGTGAGCCA AGATCATGCT ACTGCACTAC AGCCTGGCAA CAAAGCGAGA CTCTGTC
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Predicted Small Protein

Name NONHSAT134532_smProtein_1547:1786
Length 80
Molecular weight 8676.5997
Aromaticity 0.101265822785
Instability index 82.5860759494
Isoelectric point 4.01751708984
Runs 9
Runs residual 0.0263568579851
Runs probability 0.0582543327641
Amino acid sequence MDGCTILCDVIAMFMPSPLPGMPFCMNACEMLLLLCMAWLPWLAGISSFVVFLSSLCITV
SFVFLACKLLEDRGMSESI
Secondary structure LLLLLHHHHHHHHHLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLHHHEEHHHHHHHHH
HHHHHHHHHHHHLLLLLLL
PRMN LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHH
HHLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTTTTT
TTiiiiiiiiiiiiiiiii