NONHSAT134664

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT134664

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

651 nt

Genomic location

chr9+:126605315..126605965

Exon number

1

Exons

126605315..126605965

Genome context

Sequence
000001 ATGAAAGATA CTGACATCAA AAAACTACTT TATACCCATA TTTTATGCAT ATTTTCAATT ATCCTAAGTG TCTTCATTCC 000080
000081 ATCATTCTTC TTGGAGAACT TCTCAATATT GTAAACACAC TTGACATGGT TGTGCATATG TTCTGGTTTT GTAGCTGCTG 000160
000161 TCAATCTAGT ATTATATTTA GTAGTGAAAC CAAATGCATC CCCTAAAAAA GTTCATTATC ACACAAGGTA ACTTGATTTT 000240
000241 TGAAATGCTG TATCTACCTT CTTTTGTCCT GTTTCTCCTT CCATGTAATT TTTGTTCTAT ATGGAGCTAA AAGAGTTGGT 000320
000321 GTTGGAAACA TTTTTATTTG CAGTCATTTT GTCTACTTTT ACCACTGTAC CTTATGTTTG TTAGAACCAA ATCTCAAAAG 000400
000401 CATAGCTTAG AGTTTTCAGT AGAAATGGTG TTACAGCCAT TTGGGAGAAT AGTCTCCAGA TCATTACAAT TTCTAGTTTT 000480
000481 GTAGGAGCAT AACTTGAAGC ACTGCCAATA CCACTGAGTG GAGAAAGACT ATGGCAGGTA TGGCCCATCT CCTATATGCT 000560
000561 TGGAGTGACC TTTAGCAACA TGGATGGACT TGTTATTTTA CCATTCTGGA TATACTGGAA TATAAAGCAA TTTCTATACA 000640
000641 AGAACAATTA A
[back to top]

Predicted Small Protein

Name NONHSAT134664_smProtein_44:205
Length 54
Molecular weight 6121.3061
Aromaticity 0.11320754717
Instability index 65.5471698113
Isoelectric point 6.21343994141
Runs 10
Runs residual 0.0284169351127
Runs probability 0.010687157746
Amino acid sequence MHIFNYPKCLHSIILLGELLNIVNTLDMVVHMFWFCSCCQSSIIFSSETKCIP
Secondary structure LLEELLLLHHHHHHHHHHHHHHHHHHHHHHHHEEEELLLLLLEEEELLEEELL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
PiMo oooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiii