NONHSAT134717
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT134717 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
886 nt |
Genomic location |
chr9-:127709886..127710771 |
Exon number |
1 |
Exons |
127709886..127710771 |
Genome context |
|
Sequence |
000001 ATAATTAGGG ATTTGTATTT TGGCACAAAA CAGTATCAAA TTTTTATTGT AAAAATCCAC AAATCTGACA TTTTATCTTT 000080
000081 TATTCTAGCC AGGATGTATT CTTCATTTGC ATGTGTGTGT TTCTCTTAGA AAGTGGTGCT CTCAAACCTT TCAAAGCACA 000160 000161 GAATTTATTG TACCCTCTTT ATTTTTACCA AATTGAAACG TTTCAGGATT TCAGAAGCAA AGTGCAATCC AATTGTGGCT 000240 000241 GGAGTTTTCC TGATAGAGGA TCCGGGTGGT TCCCTCCCCT CCAACTTCTG GCTACTGCCC TTTATTTCCT TTGTGCAATA 000320 000321 GAATTCCCTG AAACAGATTA TGTCGTAATT ATACTGATTT AGTCAGGATA ATGGGAAAAG CGACAAATCG GATTTATGTA 000400 000401 TTAGGTATTA TGGAGCTTTC TTTAGCACTC TCCTCCAAGT TTAATCTCTG ACATGTGTGA TATAGTAACT TTCTGTCTCT 000480 000481 GAGAAGCAGT TTGGACCCAG CTGAAAAATT TTATTTATGG AGACTTGTAA TCAGCCTGAT ATACAGAGAA CACTCTGGAC 000560 000561 TGGAAATATA GTCAGGTACC AAGGTCTGCT AATTTGGCCA TTGCCAGTGA TTCAAAACCA CCTCCCCACC CTGAGTAAAA 000640 000641 GATTTGATAT GAATATGAAT GCTATGAGTC TCCTGGTGAT GTTTTGGGTG TATATGTTCC TGTGTGTGTT TGGAAATCAT 000720 000721 AGAGGGTATT TACCTTGAGG GCTCTTTTGT TGACCTTATT TATTTGAAAT TCTTATTTTA TTTGTAATGg catatgtata 000800 000801 tttttgtgat gctacatgca atctctgtgt atactttttg tatatatgta tacatatttg taaatatatt ggtatgcagt 000880 000881 gataca |
Predicted Small Protein
Name | NONHSAT134717_smProtein_110:361 |
Length | 84 |
Molecular weight | 9624.135 |
Aromaticity | 0.192771084337 |
Instability index | 54.7242168675 |
Isoelectric point | 4.71502685547 |
Runs | 10 |
Runs residual | 0.0195448460509 |
Runs probability | 0.0686981098746 |
Amino acid sequence | MCVFLLESGALKPFKAQNLLYPLYFYQIETFQDFRSKVQSNCGWSFPDRGSGWFPPLQLL ATALYFLCAIEFPETDYVVIILI |
Secondary structure | LEEEEELLLLLLLHHHHHHLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLHHHHH HHHHHHHHHHHLLLLLEEEEEEE |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHH HHHHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTT TTTTTTTTTTTTTTTTTTTTToo |