NONHSAT134968
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT134968 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1959 nt |
Genomic location |
chr9+:131291200..131307181 |
Exon number |
2 |
Exons |
131291200..131291399,131305423..131307181 |
Genome context |
|
Sequence |
000001 GGTGGCTGGG GAGTGTGTGT GCAACTGGAA CACTCCTCTG ACGCATCGTG GGTTCCGTTC CCCGACTCAC TTCTCATTGC 000080
000081 CTGGAAAGCA TAGGAAAATT TCAGTTCCTG CCCTTGATAG GCAGTCCAGC AAAACTTACA TATGACTTTG CTGCCTGAAA 000160 000161 TTCTTTCTGG AACAGGGCAA GGTATAAATA AATAAATAAC AGGTTTTTTG GCCTTGGGAA GGTCCTTCAC CCGCTCTGAA 000240 000241 CCTCAGTATC CCCACCTGTA AAACAAAAGA ACTGGACATG TCACTGTAGT TTTCAAACTA TGCTTGATAG CAGTTCCTTA 000320 000321 GCGAAGAGCT TCCCAGCTGG TGTGCCTTGG CATGATGACC TCATTAGCCC TCCCAGACAA GGCCTGTGGT GGGTGAGCCC 000400 000401 CCAGGAGCGG TTCCATTCAC ATTTCCTCTC CTTACCTTTG CCTTAAAAAT GGCATAATTC ATCCGGGTGT GGTGGCTCAT 000480 000481 GCCTGTAATC CCAGAACTTC GGGAGGCCGA AGCTAGTGGA TCACAAGGTC AGGAGTTCGA GACCAGCCTG GCCAACATGG 000560 000561 TGAAACCCCC CCATCTCTAC TAAAAATACA AAAATTAGCC GGGCATGGTG GAGCACATCT GTAATCCCAG CTACTCCGGA 000640 000641 GGCTGAGGCA GGAGAATTCG CTTGAACCCG GGAGGCAGAG GTTGCGGTGC GCCGAGATCG CGCCACTGCA CTCCAGCCTA 000720 000721 GGCGACAGAG GAAGACTCTA TCTGAAAAAG AAAAGAGAAA AAAAAAAGGC ATCATTTTCT AGGTACCGTG ACAGGGAATA 000800 000801 GGTTGGGAAG CAATGACTTC AGGACAGGGG GATGTTGAGT GAATGGGGCT CAGCCCTGTA GCCAGTCAAC ATACAGAGGC 000880 000881 TTAAAGCAAA TTTCCAAAAG GCATCCCTTT TCCTTCAAGA TACTACCACC CTCTATTGGA CAACTGCCCT GTTAATAACT 000960 000961 GTACAAATCT ATGAGTGTTA CAGCTCTTTT AGAATTTGTC TAGCAGGTTT TCCAATCTTC ACTGAAAAGC TTTAAAAAAT 001040 001041 AAAGTAAAAT TATGATGGAG GTCATGGTAC CTCCCAGAGT TGTGCAGCTC ATGTTTTGCA CAACCATTTA GGGGTTCTAA 001120 001121 TGGAGCTCTG GGATCCTCTC TGCCACAGCC TTTTTGTTTT ATGTGCTGTA TGATATATTA TGGTTCCATG TAAGATTATG 001200 001201 TATGGAAAAG TTCATCTGTC AAAAACAAAA TGAAAAATCA CTGGATGAGA TGATCTATAA TTTCTCTTCC ACTTTGGATT 001280 001281 TGTATTACTT CATAGAAAAT ACCTCTTAGG CTGGGCATGA TGGCTCATGC CTGTAACCCT AGCACTTTGG GAGGCCAAGG 001360 001361 TGGAAGGATT GCTTGAGCTC AGGAGTTCAA GAGCAGCCTG GGCAACATAG TGAGACCCCA TCTCTATTAT AAATTTTTAA 001440 001441 AATTTTAAAT AAATAAATTA AAAAGAAAAT TTATGAAATA CCTCTTACGA TTTTTGAATT ATTTGAATAT TCTTCCTCTA 001520 001521 GTGGTTAGTG GTCTTGCATA TGTCATTTGA TGCTGGTATT CCTAATGGAT TTCAATGGTA AACCAAGAAA GGAGAGCACT 001600 001601 GGGAGTCCAG GTTTTTGATA CTGACGGATA GAGATAATGA TTACTAGATG AGAGATGCAG CTCCTGATGG AAAGTAGCAT 001680 001681 CAGACTCCTT ACAGCAGAAT ACTAAGGACT GCCTTCGGCT TTAATTCAAA TACTCACTTG TCTCCTTTCT TGCTTTCAAA 001760 001761 CTTGACCTCA TTTATCAGGC TGAGGATCCA TGTTTTTGTC ACATTATTGT CCTGCTAAAG CAAATCTGAT GACAAATTAA 001840 001841 AAATTCCAAG AGGACAGAAA CTCTACACCT CCCTTACATA GAAGAATAGA TTTCTGAGGA TTTCCCACCC ATGTGCTAGG 001920 001921 AGCTTTCCCC CTACTTCTCC AGCTTTCTAT GATGATAGC |
Predicted Small Protein
Name | NONHSAT134968_smProtein_299:445 |
Length | 49 |
Molecular weight | 5468.1646 |
Aromaticity | 0.125 |
Instability index | 80.0166666667 |
Isoelectric point | 6.21612548828 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0308375602494 |
Amino acid sequence | MLDSSSLAKSFPAGVPWHDDLISPPRQGLWWVSPQERFHSHFLSLPLP |
Secondary structure | LLLLHHHLLLLLLLLLLLLLLLLLLLLLEEEELLLLLEEELLLLLLLL |
PRMN | - |
PiMo | - |