NONHSAT134993

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT134993

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

886 nt

Genomic location

chr9+:131594024..131594909

Exon number

1

Exons

131594024..131594909

Genome context

Sequence
000001 ctggtcTCGA ACTTAGATCT TATACTAAAT TTGTTGTGAT TTTTGACAGG TTTATTTTGT AGGCATGACT GATTAAGACA 000080
000081 TTGGCCATTT GAAAAAACAA ACACAAAAAT CCCCCCAAAA CAACAATAAC AAACAGACAT GGACCATGTG ATTGGGCTCA 000160
000161 AAGTCTAGTC CCTCACACCT CCATGGAGGC AGAGATGGAG GGGGCCCGAT GGGCTAAAAG TTCTGACCCC GTAATCGTAC 000240
000241 AGTGCAGAGG GATTCCATGT GACTAACaag acatgcctat cttccagaaa ctccaaggat tttaggaatt ctttactaag 000320
000321 gaccaggggc aaacaccaaa tatgtatttt attatatgat aTATTCCTAT Cagctccccc agttaaacat atgatatgag 000400
000401 ccaaacccat gcgcttgcta tgcaaatgca acttcaagac caggccccta acaccacctt ccaaagaaat tCAGGAGCTA 000480
000481 CTATTGCTAT CCAGTGAGAC TCAATCGGGG ccagctagaa ggcctgggca caccacttca cctcacctcc agagtgcttt 000560
000561 cctctcttgt gaactggaga taactcaggt ctcagtctca gagggttgtg taagatgatg tgcgtctgag tgcctcgcag 000640
000641 gtagggcttg cacgatcaac attcagtCCT CCTCCTGAGA ATTATTTAAG TCCCTGGTCC TCCTGGCCCC CACTGTGCTG 000720
000721 TTCTCTCACC CCTGTGGGAA TGTCCATGTC TTCCTTGTCA CGAACCCCAA TCCTCTCcac acacacacac acacacaaac 000800
000801 acaTATGACA CCCCCACCCC AGCCACCACA CCCAGCACCA ATAACTGCTA CCATCAGATT AATATGAGAg gccagctatg 000880
000881 gtggct
[back to top]

Predicted Small Protein

Name NONHSAT134993_smProtein_395:496
Length 34
Molecular weight 3633.0557
Aromaticity 0.030303030303
Instability index 48.1636363636
Isoelectric point 6.49566650391
Runs 7
Runs residual 0.0279973649539
Runs probability 0.0394049511698
Amino acid sequence MSQTHALAMQMQLQDQAPNTTFQRNSGATIAIQ
Secondary structure LLHHHHHHHHHHHHHHLLLLLEELLLLLEEEEL
PRMN -
PiMo -