NONHSAT135219

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT135219

Source

NONCODE4.0

Same with

,

Classification

sense

Length

5366 nt

Genomic location

chr9+:134366152..134375584

Exon number

3

Exons

134366152..134366967,134367556..134367647,134371127..134375584

Genome context

Sequence
000001 AAACAGTAAG AGTCTTGAAC GTGTGTGCTG TACAAAGGAA TGCAGAGATA TACGTCCGAT GCAGCTTTCA TCTTTTGGGA 000080
000081 CTTGGCTTCG CCATTACTTC TGACTTTCCT CACTCGTCCT CTCCTTGCCC ACCCCGCCCC GTGTGCACCC ATAAATCTGG 000160
000161 TGTGCACCCA CAGATCCTAT GCCGCTCTGC ATCCCGAGTG TCCTGCAGCT GTGTCCAGTG TGTGACACAC TATCCTGGCA 000240
000241 GTGTGCAGGC CCATGTTGGA CAGGGCCCTG CCGCTTCCTT GGCACCTTGT ATGCTTTCAG TAAGCACTTG CTGGACAAAG 000320
000321 GCAGAAAGGG CTGAAGATAG ACGCAGCCCT TAGCAGAGAT GTGGATGAGA CACACTTAAC GCTGTTAGTT CCCATGCCTG 000400
000401 CAGCCAGCTT AGTCTTGCCC GTTTTCTCAC CACCTACTCT ATTCCAGCAA GAAGACGTGC CTCTGCCATC GAAGGTGTGA 000480
000481 AATCCTGGGC GATCTCTCCT GTGCTGCAGT AGAAATTAGA GCATGTCCTG CTTTATGCAG GCTTTGCTTT AGTTCTTCTG 000560
000561 AAGTGTATGA ATCTGAAGTG CATGTGCGGT CGCTCTTTGG TGCGTTTGGG GTTTCTCCAT AGCATCATTC CCCCTCCTGA 000640
000641 CTGTCATTGT CGCCCAGCAG CTGACCATGC CACTGCCTCG GTACGGCTCC GGGCAGCAGC CACTGATCCT GCCCCAGTCT 000720
000721 ATTCAGCTGC CACCTGGGCA GAGCCTCTCC GTTGGGGCCC CCCGAAGGAT TCCTCCGCCC GGGTCCCAGC CGCCAGTCCT 000800
000801 GAACACCAGC AGAGAGCCCT CTCAGATGGA GATGAAAGGC TTCCACTTTG CCGACAGTAA ACAGAATGTC CCTTCAGGAG 000880
000881 GCCCCGTGCC ATCGCCACAG ACCTACAGGC AAAACAACGA GTGGATGAGA AACCCAGCCT GGGAGCCGTG AAGCTGCAGG 000960
000961 AGGCCCCCTC GGCTGCCTCC CAGATGAAGC GAACCGGAGC GATCAAGCCT CGGGCTGTCA AAGTGGAGGA GAGTAAGGCC 001040
001041 TGACAGTGCC TGGCTGCCAC CTCGCCTCTC CCTACTGAGG ACGGTGCCGC CATGCGGCCT CGACACAGCC GACACTCGGG 001120
001121 AGCCTCACCA GATCCACCGT CCAAATGCGT GGCCCAGACT GAGAGACCTC CCTCCTCTCC ACTCCCGAAA GCTCCGTTGT 001200
001201 CAACCAGCTT GCACCCGTGG ATATATGGCA TTGACCCGCT TGCTTTGATA CGAAACAAAA AAGCAGACGA CTCCTTCATC 001280
001281 CCATCTGCTC CTACCGTGAC TGTGGAGTGA CGCCTCCTGT GCAGTGCAGA TTTGCCCTCC CTGCCTCCTC CCTGTCCTGC 001360
001361 CGCGCAGCCA GGGCGCCTTC TCAGCAGTGC TTCCGGCCCA GCCGCCCATC CCTAGGCACA GTGATTTGGC AGCAGGGTCA 001440
001441 TTTTACTTTG AGGCTTTTTG TTTTAAAATG TAGCCAAGGT TTTTACAAAG GGGAAAGGAA AAGAAAACAA AAACGCAAGC 001520
001521 TCCATGTGTA TAGCTGAACT TTTATATGTT TCTTGCCAGC CCCTCCGCTC CCTTCCATCT CTAGCCTCTG TCCTGTTTAG 001600
001601 TTTGATACGT CACTGCAGTA CCTTAAGAGG TGACTCTTAA GAATGCATCC CCTCCTGATT CCTCAGCTGG TTCACCCTTG 001680
001681 AGGTTATTTG CAAAAAGAAA AGGAGGTTCT TGAGGGCACC GATTGCGAGC ATTCTGGTGC CTGGCTCCCC GCCTGGGAAG 001760
001761 CGATGGGGTG CTCAGAGCAG CAGGCAGGTT GGGGGAGGGG GGGGGTCATA GTTGGGTTCC AGCTCCTGGC TTGATGAGCC 001840
001841 CAGGGCGCTT ACAGGCAGCC CATGAAGTTG ATGACAGTTT TAGCATGAGA ATCACACAGG GTCCCTGTCC TGGGCTCCTC 001920
001921 TAAAGCCAGT GGATGTGCTG GGCACCAGAG ACAAATCATG GAGATGGCTG CTGGTGGCTC CCAGGTTGGC CCAGATGGGG 002000
002001 TGAGCTGACA TACCACAGGC CCATCCCAGG CCCCGTGGGC TCTGCTTCTG GGGCTCCATA CCCTGCCCTG CAGGGGTGCT 002080
002081 GTGTTTTTCA CACATTTCTT TCCCTGAAGC CTTCTGTAAC CTGTCATTTT CCTTCCTTCC TCTTCCGGAG CCTGCTGCTT 002160
002161 TCTCTGGACC TGTCTCCACC TCCCACACAG CTCATCGTGA ACACCACTTG GTGATGGAGG GAGTGGACCC GTGTGTGGTC 002240
002241 CCCAAGTGAG GCCACTGGGA GTTTGTCCTT TTCCTCCTTT GCTTCACTCC CAGCAGCAGA CCCAGGTTGT CAGGACAGGA 002320
002321 GGGCCTGAGC TAAGCAGTAG GCATCAGTCT CGTTTGTCTT CAGACGGCGG GGGCAGGTCC AGGGTGAGGC TGGGTGGAGG 002400
002401 GCTGACCAAG GTCCAAAGGG CCTGCGCAGC CTCCGGGAGG GCAGCTTCTC CAGCCAGAGG CTTGTGTGAG CCATCGTGTG 002480
002481 CTGGGCTTGT TTTTAAGTAA GAAACAAGGA AATCACTCCA GATTCTGTCA TTCCAAGGAA AGGGAAGGGG ACAGTTCAGG 002560
002561 TTTCTCAGCT GTTCTTAGGG GTCACTGAGC GTCTACCTCC TCCTCCAGAG GAGGCTGGCT CAGAACACCT AGAGGAGGGG 002640
002641 GCCGGGGATG CACCCCCCAC CAGAGGCTGC CTTCAGCGTC TCACGGGTGC AGGACAGCGC TCAGGCTTGG GCTCTAAGCT 002720
002721 CTGTGTCTAG TGTAGAACAT GGGGAAGGAG CATCTTAGGA ACTGCTGAAG TAACTTCTTA CTGCTCTCAC AATTCTAAGG 002800
002801 AAGCGGGAGA ACGGCCTCCT ACCAACAGCG CCCACCCCAG AGCTGCCTGG GAAAGGGCAG TTTTACTGAA AGGTGCTTTA 002880
002881 CTGTTCACCT GCATCTTTCA GCAGCTCCCC TCCTGCCCTC ACCTGGTCTT TTCCCTCTTT ATCCCAAGCC TTTATGCTTG 002960
002961 AGTCCCTTCC CCAGGGGCTG CCCACCCGAC AGTTCCAGGC ATTCCCTACC TGAGCTTCTT GTCTGCTTTT CCTTCTCCCA 003040
003041 CTGCAAGCGG CTGCTTGTGG GGCCTGGGAT GAGCCCTCTC TGTCCCCACC GGCCCTCCTT GCCAAGCCAT TCCTGGGTGA 003120
003121 GTTCAGGCCT GCGGGAGCCA CACATTCATC TCCACCTGGA CACTTGAGCC GCATGGCCAG ACCCCTCCCA CCTGATGCGG 003200
003201 TGGTGCGTGT GATTTGTCAA AAGAAAGCCT TCTGGATGCT GTTAAGATGT ACCCTTCAGG TGAACCTGGT ATCAGACCCA 003280
003281 CAGTACTTGC TGTTTGAGAA AAAATAAAAA CAAAAAGGTC ACCTGTTCTC CAGCCCTTTT CTCTTACCTG GTATTTCCTT 003360
003361 CCTTTCTCCT CCCCCACCCC AAATAAAAAA ACAAAAAACA CTAGAATTTA TTTATATGTA TTGATGTTGT AGGTCTAGGT 003440
003441 GAAAAAAAAA GAAGTAAATG TTTCACTGCT CTATTTATAT ATAATGTCTG AATTAATTCT GTGCAGGAAA GGCCAGGAAA 003520
003521 TTGCATGTGA AGTTCGGTGC AGTCACCACC TGTGTGTGAC CTGAGCTGCA GTCTCTTCGC TGAGATGCAG GTTTTAAATG 003600
003601 AGACTTGGGG GGCTGAGGGC AGGCCTCAGG CCTCCCAGCG CCCCAACCCC TCCTTGGTCT AATGAAATGC AGTTCTTAGT 003680
003681 GCAGAGATGT TTTAAGGTGC AATATATCTC TTCCTTTCCC GTGGTTTTAG AGCCAAGCTC AAGGTAGTAG GACGTAGGGT 003760
003761 CTTATTTTGT TTTCAAACCC CCATCCTCAG AGCGCAGATA CATGCAGAGG CTTCTGCCAG GATACCACGG GGCCTTAGTG 003840
003841 GGAACAGGTG GAGACCAGCA CTTCCCTTTC CTGCTGCTGA GGTAGGGATT GGGGGGTCAG AACCCACTCA CTTTTGCCTG 003920
003921 TTAAAGTTGC CCTCCTGACG CTGGCAGCTC TGCCTTGGTC ACTGGGGATG CGGCTCGTTG CTCAGCCACC AGTGGCCTTG 004000
004001 CGGTATTGTC CACCATCCAC TAGAGTGGGA TGAAGTCCAG AGTGTGGGTA TACATCTCAG ATGCCCATCT ACCCACTGGG 004080
004081 GACTTCAATG CCAGCTGCAT TTGGTTTGGT TTTCTTAACT GTTGGCTTCT CCCCACAGCG TTTTTTGTTT TTTTTTAAAC 004160
004161 ATTCATATTG TTTTCAAACT TGGAATTCAT AGACACTCTG GCTCTAGGTT CCTTAAGGGG GAAAACAAAA GATGACTTTA 004240
004241 TTTCACATTC AAGAAAATCA GTTCAGTTCC AAAGCTGTGG TCCTTCCAGC CACTTCTAGG GACACTGGGG AACCTTGTTA 004320
004321 AACGTTGACA TCAGTGCTCT CCAGCCGTGC TGTCACCCTC CTATCTTCTG GATCTGCCTT CGCGATGGTC AGTGACAGCT 004400
004401 TCTGGAAGCT GAGCACACAC AGGTGCACAG CCATGCTGTG GTCTGGCCTG CTACGGCAGC ATGGCAGCTC TGGTGGAGCC 004480
004481 TTCTCCCTTG CCATTTGGTT CCCCTGTGCC AAGTAGCTGC AGGCTGCCCC TCAAATCTTC ATTTGTCCCT TTTCACTTCC 004560
004561 TGCAGAACAA GCCTGGGTTA GAGGGTCTGC TGGAAATGGC CTTTGAAGAC CAAGGATACC AGGATGTGTG CACTCTGTCG 004640
004641 TGTTCTGTGA TGAATGGGAA ACGTAGGCTT CCAGAAAGCC AGCTCTCTTC TGAAATGTGA CGGACCTAAG CAGGAAGTCA 004720
004721 TCCAGGACAG GAGTGGCTCA GTGTTGGGGA TGGACGCTGT CGCCCAGCCA TGCTCCACCA GGGCCACCAA TGTGTAGTTG 004800
004801 GCTGGTGGTC TTCGGGCATG TGAGACCTGC TCTTCACTGT TTCCACCCCA CTTGGTGGCC TCCAGGATGG TAGTGGCACC 004880
004881 CTCAGAGCCC CATCTTCAGC ATGTTCTGAA GCCTCAGAGT GGAAATTCCT GCTAAGGCTC TGTGTGGACG CCTTTCTCCC 004960
004961 GTGATCTAAA GGGGACACTG TACTCAAGCT TTTGACCTCA TGCCTTGTGT AGTAAAAAAG GATTTGGGGG TTTTGTTTGG 005040
005041 TTCCTGAGAG GGttgtgttt tgtttttgtt tccttttgtt tatgttttgg cctttcctct ttgtctttCC ATGTAGACCA 005120
005121 GATATTTGAA AGGGCAGACG ATGGCTAGAG GTGTAATGTG CAGCTTGTTT ATACGGTATT TTGGGAAACT TACCTTGGAT 005200
005201 GGGAAATCGA ATCGTGGATT CACCAGGCCG GTGCTGGCAC ACTCACCCTC GCCCTTTCCC TCCGGTTCAG TACCTATTGT 005280
005281 TTCTCCTTTC AAATATGTGA TTGTACTAGC TCTTTCCATA TGAAAGAATT CTCCTTATTT AAATAAAAAA AGTTTAAAAA 005360
005361 GATAAA
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Predicted Small Protein

Name NONHSAT135219_smProtein_566:859
Length 98
Molecular weight 10522.9478
Aromaticity 0.0412371134021
Instability index 60.5680412371
Isoelectric point 8.76922607422
Runs 13
Runs residual 0.00248186330661
Runs probability 0.0403027461851
Amino acid sequence MNLKCMCGRSLVRLGFLHSIIPPPDCHCRPAADHATASVRLRAAATDPAPVYSAATWAEP
LRWGPPKDSSARVPAASPEHQQRALSDGDERLPLCRQ
Secondary structure LLLEEELLLHHHHHLLHHHLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLHHHHLLL
LLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLLL
PRMN -
PiMo -