NONHSAT135434
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT135434 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
462 nt |
Genomic location |
chr9-:138117170..138118073 |
Exon number |
2 |
Exons |
138117170..138117519,138117962..138118073 |
Genome context |
|
Sequence |
000001 ttgtgtgagt gcatatgtgt gtacatgtgt gtatgtacgt gtgtatgtgA GTATACCTGA CTATGCATGT GTGAGCATGT 000080
000081 GTGGGTATCT GTGTATGCGT GTGAAGATGA gtgtgcatgt gtgtgtgtgt gagtgcacgt gggtgtgggt gtgcatgtgA 000160 000161 GCGTGCCAGG CCCTCGGAAG TGTGTAGAAG GCCTTGTCAG CCAGCAGCTC CCGTTTCCTT TCCTGCCCCT ACCCTACTGT 000240 000241 GCAGAGCTCA CCCTGCAGCT CCATCTCTTT CTTTCCACTG TAAACCAAGC TCGAGGGGCC CAAGCCTCGT GGGGGGTGCA 000320 000321 TGGGCTGATG TGTGAGGAAG AGCAGGTGTG CCCACCCAGC GCCTGCCCAT TGCCGCCGTG TCTGCCCGAC GCCGTGTCTG 000400 000401 ACAGCATCCT TGAGGGACCA GGCTCCTGAC TGCAGAGAGG GCTGGAGCCC ATTATGCCCG AG |
Predicted Small Protein
Name | NONHSAT135434_smProtein_116:334 |
Length | 73 |
Molecular weight | 7438.6544 |
Aromaticity | 0.0416666666667 |
Instability index | 58.9847222222 |
Isoelectric point | 8.89093017578 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.026732614968 |
Amino acid sequence | MCVCVSARGCGCACERARPSEVCRRPCQPAAPVSFPAPTLLCRAHPAAPSLSFHCKPSSR GPSLVGGAWADV |
Secondary structure | LEEEEELLLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLL LLLLLLLEEELL |
PRMN | - |
PiMo | - |