NONHSAT135470
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT135470 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1234 nt |
Genomic location |
chr9+:138716695..138798984 |
Exon number |
9 |
Exons |
138716695..138716726,138719253..138719430,138741983..138742079,138742168..138742307,138754313..138754454,138758302..138758382,138773479..138773640,138774662..138774924,138798846..138798984 |
Genome context |
|
Sequence |
000001 GGGATGGGCT GAAGGCAGCA GTTCCTTTCC CGAGGTATTC AGGTTCTTCC GGGTGCAGGT AGTGCCTGTG ACAGCCTTCC 000080
000081 GCCGGCAGCT GCACGGGGGG CTGCAGCTCA GCCAGGGTCC CTGCAGCAGG GCTGCCTAGG AAACTGCGTT TGGTCGCGTT 000160 000161 GGAGATCGGT ACAGGAGGCC GGCTGCTCTT CTGGTGTAAC ACTGTTTTCG CGTCTTTCAG CTCCTGAACA TCCCTGGGCT 000240 000241 GAACAAAATC TGGCTTGACA TTCTCGAACC ACCAAAAAAG CTCCGCAATA AAAACCATAA CATTCGGCTT CAACACTAAT 000320 000321 GGCGCATACA GCATATCTTC CAAGGTGAGA TAAAAACATT TATTAAGATA TTCATTGGAG AATTCTCTCA GAAGCCGAAT 000400 000401 ATTATACAGA CTGTCGGCCA TCGACGTTAC CTCCTTTAAG CATATATCAT CCAGTTTCAT CTGCTCTGGG CAATAATAGT 000480 000481 GAATCACAGC TAAGAGAGCA GCACCATCAC TGCCGTCTCT CATCAAATCC TCCAACAACG GGAAGTAGGG TGACTGCCTA 000560 000561 TCAGAAAGGT GCTCTCGTCG ATAGCGGACC TTTTGATGAG CTGGACTTTC CAATAACTGT TGTTTTAATT TAACTTCTTT 000640 000641 CTCTGTTATC TCTCTCATTT TAAGATTTAC CTTGTTGATC CAGAACACCA TGGCATCCTC GAGGTCGTAC GGAAGTTCTT 000720 000721 TCGAGGCACT GAACGTTGAG AAGCGCTTGA CACTGGCCAC CACCTTCTCG ATGCTGATCA TCTCCACAGT GTAGGCCATC 000800 000801 ATCAGGGCAT CCACCATTGC CATGTGGGCA CTCATTTTTA TGGGTGCGCG ACTGAGGTCG GACTCTGTCA CGGGGGTGTC 000880 000881 ATCACTCTCC ATCACATAGA TCCCTTTCCG GGACAGGGCC TGGATGACAG ACTGGTGTCC CTGTAAGGCG GCCACCTGGT 000960 000961 CCCCTTTCAG GATGAGGCTG CAGACACGGC AGTACAGCTC GCTGGACAGG AGAAGCTTGA TAACAGGCGG CTTAATGTGC 001040 001041 TCCTGCTCAT ACTGGTCAAC GTAGAAAGGG TCTCTGAGGT CCTCAGGGAT GTTATCTCGG CCGTAGGCCT TGGCGCAGAT 001120 001121 CCACTGCAGG TTGGCGGCGA TCTTGGCGCG CGCCGCGTCG TAGCGGTCCA GGGGCACGAG GTCGGCGGCG CCGTCCGGCG 001200 001201 GGGCCTCCAT CTTCCTCCAG CCCTCGGCGG CGGC |
Predicted Small Protein
Name | NONHSAT135470_smProtein_923:1063 |
Length | 47 |
Molecular weight | 5383.1962 |
Aromaticity | 0.130434782609 |
Instability index | 60.3934782609 |
Isoelectric point | 9.24456787109 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0427780721898 |
Amino acid sequence | MTDWCPCKAATWSPFRMRLQTRQYSSLDRRSLITGGLMCSCSYWST |
Secondary structure | LLLLLLLLLLLLLHHHHHHLEEELLLLLLLEEEELLEEEEEEEELL |
PRMN | - |
PiMo | - |