NONHSAT135640
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT135640 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
794 nt |
Genomic location |
chr9+:139886894..139887864 |
Exon number |
3 |
Exons |
139886894..139887426,139887505..139887695,139887795..139887864 |
Genome context |
|
Sequence |
000001 ccatggatcc gctgtcgccg ccgctctgca cgctgccgcc gggccccgag ccgccccgct tcgTGTGCTA CTGCGAAGGG 000080
000081 GAGGAAAGCG GGGAGGGGGA CCGCGGCGGC TTCAACCTCT AGTGAGTGGG GGTCCGCGGG GAGGTAGGGG TGCAGGGAGC 000160 000161 TCCGCGGGCG GCCCCGCCTG ACAGGCCTTC TCCCCCAGCG TGACCGACGC CGCGGAGCTT TGGAGCACCT GCTTCACGCC 000240 000241 GGACAGCCTG GCGGCCCTCG TGGGTAACTG GGCGGGTCTG GGAGCCGCCA CACCCCTCCT TGCAGTGCAG ATCGTCTATG 000320 000321 GGGCGACAGA CATCTGGGAT TCCCCAGAAG GCTCTGACAC CCTCTGCCCG CCCTGTAGCT GTAGTCCTCC CATTGGCTAG 000400 000401 GGCTCTGGGG TCGGGCAGGT TTCGGGTGCC CCCAGTGGGC CTCGGGTTCC AGGCAGCTCG TGACAAGCCC CTGTGCTCTC 000480 000481 TAGAAAGCCC GTTTTGGCCT GAGTGCGGCT GAGGACATCA CCCCCCGGTT CAGGGCAGCC TGTGAGCAGC AAGCTGTGGC 000560 000561 TCTGACTCTG CAGGAGGACA GAGCATCCCT GACGCTTTCA GGGGGGCCCT CGGCACTGGC CTTTGACCTC TCCAAGGTAC 000640 000641 CAGGCCCAGA GGCAGCCCCC AGGCTGCGGG CGCTGACACT GGGCCTGGCA AAACGCGTGT GGAGCCTGGA GCGGCGACTG 000720 000721 GCAGCTGCAG AAGAGACAGC TGTCAGCCCG AGGAAGAGCC CCCGGCCTGC AGGGCCTCAG CTCTTCTTAC CAGG |
Predicted Small Protein
Name | NONHSAT135640_smProtein_317:511 |
Length | 65 |
Molecular weight | 6743.8415 |
Aromaticity | 0.0625 |
Instability index | 53.7859375 |
Isoelectric point | 10.762878418 |
Runs | 8 |
Runs residual | 0.02359375 |
Runs probability | 0.04641406112 |
Amino acid sequence | MGRQTSGIPQKALTPSARPVAVVLPLARALGSGRFRVPPVGLGFQAARDKPLCSLESPFW PECG |
Secondary structure | LLLLLLLLLLLLLLLLLLLEEEEEHHHHHHLLLLEEELLLLLLLEELLLLLLLLLLLLLL LLLL |
PRMN | - |
PiMo | - |