NONHSAT135714
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT135714 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1701 nt |
Genomic location |
chr9-:140144671..140147949 |
Exon number |
4 |
Exons |
140144671..140145819,140146843..140146958,140147327..140147427,140147615..140147949 |
Genome context |
|
Sequence |
000001 GCACACCACA GAGCTCGGGA AAACCAACAG CATCTCAGTG TAGCGGGGAG ATGGGCAGAT GGGGGATCCA GGCTGGGCCA 000080
000081 GCCTTGTCCA CAGCCCATAG AAGGGTTGGC CAGCCAGAAG GGTGCATCGG GGTGCCCAGA GGGTCAGAAG GCCAGGCTGG 000160 000161 GGCCCCAAGT CCCAGGGGAG GCCTGGGAAA GCCCCGGGGG AGGCCATGGT TCCACTCGGT GGCCGGGCCA AGCAGGTTGT 000240 000241 GCCCAGCTGG CTCTAGAGCG TGCAGAAGGG GCCTGTGTCG TGGCGCTTGG GTCTGCGTAC ACCCTGGATG ACCACGCCAG 000320 000321 GCGCCGAAGG GAAGCGCCTC CTTACAGGTG CTGAGCCAGG AGGTGAACGC AGGGGAGCGG CTCATCGAGA AGGCCGGCGA 000400 000401 GCGGGGGCTC TGCAGGCGGC TCCCAGGAAG GATATTTCAG CTTTCTGCGT GAAGGGGCTT TCGCTCTGGA ACCACAAAGT 000480 000481 CTGCCATGCC CTGCGGCCAC CGCCCTCTGT AGTTGGAGGA TGGAGAGAGA GAAGGCTGGG AGCCCCACCC AGGTGACCAT 000560 000561 GGGTCCAGTA TTTGCCTCCA TTGATGTAAA AATTTGCCAG GAATTTCACT GCCTTCTGGT CAGAATTCAT CATCAGAGTC 000640 000641 TCCTGGCTCT CTTCCCCAAC GGCACCACGG AGCTCTGTGA CCTCACTGGT AGGCCCCTCT GTTGCTGGGA CTCCTGAGGA 000720 000721 AGACACATTG TCTGGCCCTG GAGGGGCTGC CCCGGGCCCC GACCCCTGGT GGGCCCCTCC CCCACTAACT AGATGATCAG 000800 000801 CGGGTCCGCC TGGGCCAGGA CCCCCAGCCT GCCCCGGTGA CTCCTGGCCC AGCCCTCTCC CTCCCCCCAA CCTTTCCAGC 000880 000881 CTTCTCCCCT CTCCTGCACC CTGGGGTCTC CTGGGAGTCT GGGGTCCACT CTAGCAGGTC GGGGAGGACT GAGGCCTCAG 000960 000961 CAGAGGGGGT GGAGGGAACA GGACCCACCG GCATCCACCA AGCCCTAGGA GATGCCCAGC TGTGTCTGGC CAGCCAGGAC 001040 001041 CCCCTGGGGG TAGGAGGGAG GGGTCCAGGA AGGCTCCCTG GAGGAAGAGG AGGAGCCGCC ACCCCATCTG GATTTCCACT 001120 001121 TAAGGGAAAA GCAAATCCAC ATCAGATGGG TCTGACACCA GAGGCAGGCC GGGCCTTGGA GCCCAGCCAG GGCTGGGGTG 001200 001201 TGAGGGCCTA CCTCTCACCT GGGGGCACAG AGGCTAGAGG GTGTCACAGA TGGCCGGGCT GCCAGAGCTG CAAAGGAACA 001280 001281 GCCAGCCTGT GTGAGCAAGA GCCCGTGTGG GCACCAGGGC CCTCACTGTG TGGTCTCTGG AGCTGACCAC CAGTTGGTCC 001360 001361 CAGCCCTGAC CTTGGCCCAG AATCCACCAG GGCAGGGCCT GTGAACAGGG CCAACTTGGG GCCCTCCTCC GCCCTCTCTG 001440 001441 GATGCCTCCC CTTCAGCACT GGGCCTGCCA GGCAGACAGA TGGACACGTG CTTGAGGAAA CACGGGTTTT ATCTGGGCGA 001520 001521 GGGGTTCACG CCTGTGCTCC GGGGCCCCTG CCCAGGTTGT GCCGAGTTCA GAGTTGACTG GCTGCCAGTG GAACAGAGTG 001600 001601 TACTTTGCTA ATGAAGCCCT TGTCATTGGA CAGATAGGCC CCTCCAGGTC CTCCCTGCCC TGTAATAAAC GTTGCCACCG 001680 001681 TGAATGGTGC TGCTGGACAT C |
Predicted Small Protein
Name | NONHSAT135714_smProtein_50:310 |
Length | 87 |
Molecular weight | 8863.1083 |
Aromaticity | 0.046511627907 |
Instability index | 52.3081395349 |
Isoelectric point | 11.7036743164 |
Runs | 11 |
Runs residual | 0.0117146824019 |
Runs probability | 0.0271474683239 |
Amino acid sequence | MGRWGIQAGPALSTAHRRVGQPEGCIGVPRGSEGQAGAPSPRGGLGKPRGRPWFHSVAGP SRLCPAGSRACRRGLCRGAWVCVHPG |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLL LLLLLLLLHHHHLLLLLLLEEEELLL |
PRMN | - |
PiMo | - |