NONHSAT136056
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136056 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1789 nt |
Genomic location |
chrX+:1519424..1532479 |
Exon number |
4 |
Exons |
1519424..1519479,1520355..1521118,1522354..1522478,1531636..1532479 |
Genome context |
|
Sequence |
000001 TTGTTTTCTT TTATTTATTT ATTTAGACGG AGTCTCACTC TGTCGCCCAG GCTGGAGTTG CAGTGAGCCG AGATTGCATT 000080
000081 ATTGTACTCC AGTCTGGGTA AGAAGAGCTA AACTCCAGAG TCTGTCTCAG AAAAAGGAAA ACAGCTGAAA TATAGGAGAC 000160 000161 TGACGCCCAG CCCAGGAACA GGTAAGCTGG GTGCACGCGC CGTGAAAACA GCACCTAGGC CTGCTCCGGT TCTCGCTTTG 000240 000241 CAGATGCCTC CTGAACCTCA GTGCCTCCTA AGGTCAAGGC TGTGAGTTAA AGGGCTCCAC CCCAGCCCAG CCCCAGGTTG 000320 000321 GCCCAGCCAT TCCCTGGTGG AGGGGCCAGG GAGGAAAGGG GGCTGTGTGG GCACCAGAGG GTGAACTGAG GTCTGAGGGT 000400 000401 CGGGACACAG GCCGGGAACA GCAGCTGGGA GCGGAGCACG GGGGAAACGT GGATGCGCTG AGCTCCCTAC AACCGCAGTG 000480 000481 AGCATGTGCC CAGGAGGGCC TCACGGGGTG GGTGTGAGTC TGGCCTGCCT GGGCTCGGGG TGGGGGGTGT TTACAGACGC 000560 000561 ATTTCAGCCC CGCAGCAGGG GCTGGGGAGG TCCCGCTCGT GACAGTCTCT GCACCAAGGC AGGAGAGATG GAAGCCGCCC 000640 000641 AGAGAACTGC CACTCCATAG CCTGTGGGCA TCCAGGGGTG AGCGGCAGCG ATGGCGCCCC ATGGAGGAAA CACACTGGAA 000720 000721 ATCGTGCAGA AGATGGGAAG ATGCAGGCTG GAGTGCGGAG AAGGACTGAG ACCCTGCCTG GTAGACGGCA CCGTCACAGC 000800 000801 AGCCGTCTGC CTGCTAGGAG GAGCGTCTCC ACCAGCAGCA GGCCGGCCCC TGAGGGAGAC AGCAGAGAGC TGGAGTCCTG 000880 000881 GCCAGCCAGG CGGGGATCCT TCAGCAGGAC ACAGGGGACA CAGCAGGCAA CAGGAGCTCA GAACGCTCTC GGCGACCCTG 000960 000961 CTGAGTAACT TGTGGACTTT GTCGTCTGGC CAGTCATGCA GGATCCGGCA CAGGACGTAC AGCTCAGCGC TGGGGAGGGG 001040 001041 GTCCCTGAAA AAGTCACCTG GTTTAAAGAC AAAACGAGAT ACGTCCGTCA GGTATGGAAG AAGCAGTCCT CCCCGGACAG 001120 001121 ATCCTGGGAC GGCCACCCGC ATCCTAAATC AGGGACAGAG AAGAGAGGGG TGTGGGCGGG AATGGGTCTT CCTGAAGTAC 001200 001201 ATCCCCGTGG GGACTTGAAC AGAGCTCCAT GAGGAGCTGG TTAGTGATGT CACGCCCGTG CGGTTTGACT CGGGCTGAGA 001280 001281 AAACGCTGGG GACAGTGGCT CACACCTGTA ATCTCAGCAT TTTGGGAGCC TGAGGTGGGC AGATTGTCTG AGCTCAGGAG 001360 001361 TTCGAGACCA GCCTGGGCAA CACGGCGAAA CCCCATCTCT ACTAAAAATG CAAATTAGCT GGACAGGGGT GGCGGGCGCC 001440 001441 TGTCATCCCA GCTACGCGGG AGGCTGAGGC AGGAGAATCG CTTGAACCTG GGAGGTGGAG GTTGCAGTGA GCCGAGATCG 001520 001521 CGCCATCGCA CTCCAGCCTG GGCGACAAGA AGGCAAGGGA GGAAAAAAGC AGGGAATTCA GGGGCAGCAC CTGGGCGAGG 001600 001601 CAGGCAGAGT CGGCGCACAT GGGCGTGTGC CAGGGAGAGT CGGGGCCGCA CTGCCGGTGA GTGGGCAATG GCAGGGCCTT 001680 001681 CTCTGGTGAT CCCCTGATTC AGGCGCCCCA GGAGGGTTGC CTGTTGCGGG GGGCGCATGT AGCTGCACGC CCCTCTGTAA 001760 001761 TTGCTGAAAT AAAAAGATGG TCTGCTGTA |
Predicted Small Protein
Name | NONHSAT136056_smProtein_995:1231 |
Length | 79 |
Molecular weight | 8832.7927 |
Aromaticity | 0.0769230769231 |
Instability index | 40.4756410256 |
Isoelectric point | 9.51824951172 |
Runs | 12 |
Runs residual | 0.0201688555347 |
Runs probability | 0.0138888888889 |
Amino acid sequence | MQDPAQDVQLSAGEGVPEKVTWFKDKTRYVRQVWKKQSSPDRSWDGHPHPKSGTEKRGVW AGMGLPEVHPRGDLNRAP |
Secondary structure | LLLLHHHEEELLLLLLLLEEEEEELLLEEEHHHEEELLLLLLLLLLLLLLLLLLLLLEEE ELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |