NONHSAT136089

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT136089

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3116 nt

Genomic location

chrX+:2543993..2566735

Exon number

6

Exons

2543993..2544037,2544660..2546825,2547470..2547538,2551426..2551494,2554638..2554683,2566015..2566735

Genome context

Sequence
000001 CTTACATGGT TTTGGAAAAA TGTCGGATTT GATGTAGCCC CTCATTGTTT CTTCATGGTG AACGAAACAG TGAGTAACTC 000080
000081 TTTAAAGTCT CCTCTGTTGC CGAATTGCTT ATAGTTTGTT TGTGTTTTTG GAGTGCTGTA GGAAGAGCAG TGATGAAGGT 000160
000161 TTGAGGCTTC TAGATGCTTC CATATTAGTT GCCTGGGGCT CAGGCAGGGG CACACATGTG GACCCCTGGG GGGACATGAC 000240
000241 AGTTGAGCTA ACAGCTGAGG AATGAGGATG ACTTATATCC CAAGGAGTGG GTCAAAGGGT GTTTTGTGTA GCAAGTGTGG 000320
000321 CATGTGCAAA GGGCCTGTGG TCAGTGGAAC TGAGGGTGCC TGTGGGGCTC AGTGAGGGGG AAAAGAGGAA GTCAGGCATG 000400
000401 GCATGGGATG GAGGGGAACA GAGTGAGGCT ACAGTCAGTG CCCAGTCTTG AAAATGTCCC TTCGAGTGTC CCTAGGGGCC 000480
000481 ATCCTTGTTT TCAGTGCTTA TTACCCCTGC TCCCCTCTGC TTGCTCCCAG AGAGCTGTCT CCTGCCTCCC AGCTCTGCGT 000560
000561 CTCAGATCCT GGCTCTGATC CCACGCTGCT GTTGCTTACA CTCATGTACC CATTGCTAAT GTCATCATTC CCTTCGGCAG 000640
000641 CTAAGTGCAA AGTTAATTTC CCATTTGAAA AGCAGTCTGT ACTAATAACA ATCAACTGGG AGACCCAAAA GAGTGCAGTT 000720
000721 AAAGAGAAAA AAAAAAATCA AACTTTCCCT CAAAAGAAAC CAGTGATACC ATTTGGGTCC ACCTCCCTGA GGTTTGAAAG 000800
000801 CCTCTCCGTT AGTGTTAGTT GCTTTTAGGC CTCTTCTTGC TGCATTAGCA AGGTGTATCT TTCTCTTTAT ATGCAGACAG 000880
000881 TGCCCTCTTC TGGTGGGAGG CTCTCAGTGT CTGTCTACAA ATCCATGACC CAAGAGGTAG AGGGGTCCCA ACGGTCCCAC 000960
000961 TTAACTTCTG CCAAAGTGGT GCCCTTGGGA ATCCCCAACT TCCTGTGCCC ACCTGTTCTA GCTACTTGGT TCACTTTGAC 001040
001041 CCAGCTCTTC AGGGGTGATA CCCTCCCTCA TCAGGCTCCC AGATCCCATC AGGTGTTGAA ACCCCATGTG ATAGGTGAAA 001120
001121 TACTGGTCCC CAGAGATGCC CACATCCTAA CCCCTTGATC ATGTAAATGT GTGACCTTAT GCAACACATG GGACTTTGCA 001200
001201 AATGGGATTA CATTAAGGAT CTTGACATGG GACGATTATT TAGGATGAGC TGTGTAATTA CAGTGGAATC ACAGGTTCCT 001280
001281 TAGAGAGGCC TGCATCAGAG GATGAAGGAG TTGTTCACAT GTGGAAAGAG ACAGAAATAA AAGTGGAGAG GACCATTGAA 001360
001361 AAAAAAAGTC ATTGAAAGAC TTTGGCACCC AGGTTGCCAT GGCTGCCCCC AGCCCTTCAA ATTCTCCTAA AGCCCCAAAT 001440
001441 GATCTTTCCC TGGAAGATGC ACCAGCCCAT TGGATAGCTT AGATGCAGCT GTTGGAGGGT GGATCTAGCC TGTGAGGACC 001520
001521 CAGTAACCTG GACCCAATAC ATGACAACAA GGATTGAATG AGTGGTCGTT TACTGCTGAG TAATTGCTGG TTTTCCTGGC 001600
001601 TACCTGGGCC CTGGGTCACA TGGATGAGAG GGCTGGAAAA AATGATTATC AGCACAGAGT CCCAGAATCT CTGTGACTTC 001680
001681 TGGTCACAGA TATTTTGAGT GTATGTATAG AAAAAAGCAG TTGTTCCTAC ACATTCAGTG TCAGAAGTGA AGGATGAGAG 001760
001761 GGGAGAGGGG TGTGCATGTC AAAGGAAAAA ACAGCTTTTC CCCCCTGTAC GTGAGGTCAC AGCAAATTTG CAAGATTCAG 001840
001841 TGCATGGTGA GAGAAGCAGG CAGCCGCTGA CATCCAGGGG CTGGCCTGGC TCCCGCTACC TGGCTTGGGG TTTCCTGTTG 001920
001921 GACCTAAGAA ATGTCACAGA CAGGACATTT TTAAAGTCAA TAAGAAATGT CAGACAAGAG CACTGTGATG AAGTCAAGAG 002000
002001 ACCGTGGGTT GTGCTTTGGC TGGTTCTTGA TTTATTTCTG CTCAAGGCAA TCAGTATGCC AAGGTGGCAT ATTTCAGAGT 002080
002081 GTCACGTAAT GATCTACATT CTTATTCAGG GTGGGGTGTC CTGTACCCCA TCAACTGGAA GGTTGTAGCA CTTCCTGCTT 002160
002161 TCTAGACATG GTAAATGAAC TCCCTGGGTC ACTGGGAAAG TTGTAGCACT TCGCTTTTTG GTTCATACAC ATAATTGTTA 002240
002241 GCACTTCCTG ATTCCCAGGG ACATTGCAAC ACTTCCTGGT CAAGTAGATG AGTAATACTT AAATAAATAT TTCTTACTCA 002320
002321 GCATTTTGAT GTATTTATTC ATAGCCTTAG CTGAGGCAGG AAAATCACTT GAACCCTGGA GGCAGAGGTT GCAGTAAGTC 002400
002401 CACCCTGAAG CACAGTAAAA GCCACAAGAC AGAAGTGACT GATCCCATCC CAGGGATCCT AAAGAAGATT ATCATCAGAC 002480
002481 TTCTCATTGG AAACTTTGGA AGTCGGAAGG CAGTAGGCTG ATAAATTCAA AATGCTAAAA AAGAAAACCA ATGAAAACAT 002560
002561 GCTAACCAAG AAAAAAAAAT GCTACATGGC TGAAGAAATC ATGCAGAAAT CTTAGCAACA TTTTAAATGA TCCAACAAGG 002640
002641 TCTGTTGTTT CTGCGCAAAT ATGGGCAAAC ATGAGCTGGT ATAGCTTATT TTTATGGGTG CAGGGAGCAT GCAGTTATCT 002720
002721 CCACTAGCAT GTTTTTGTTT GTTTGCTTTG AGATGGATTC TCACTCTGTC GCCCAGGCTG GAGTGCAGTG GCACAATCTT 002800
002801 GGCTCACTGC AACCTCCGTC TCCCGGGTTC AAGCAGTTCC CTGCCTCAGC CTCCTGAGTA GCTAGGATTA CAGGTGCCCA 002880
002881 CCACCATGCC CAGCTAATTT TTGTATTTTT AGTAGAGATG GGGTTTCAGC ATCTTGGCCA AGGCTGGTCT TGAACTCCTG 002960
002961 ACCTTGTGAT CCACTCACAT CAGCCTCCCA AAGTGCTGGG ATTACAGGTG TGAGCCACCG CATCCAGCCT GTTTTTCTTT 003040
003041 TCAACTCATG CATAGGTTCA GAATTTAGTT CCAGGTATGT GAGAGCTCCT TGTAGATGTT TTTCATGATG AGGCAC
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Predicted Small Protein

Name NONHSAT136089_smProtein_407:577
Length 57
Molecular weight 6171.233
Aromaticity 0.0357142857143
Instability index 94.65
Isoelectric point 9.46905517578
Runs 7
Runs residual 0.0282982045277
Runs probability 0.0385721856311
Amino acid sequence MEGNRVRLQSVPSLENVPSSVPRGHPCFQCLLPLLPSACSQRAVSCLPALRLRSWL
Secondary structure LLLLEEEEEELLLLLLLLLLLLLLLLHHHHHLLLLLLLLLLLLLLLLHHHHHHLLL
PRMN -
PiMo -