NONHSAT136210
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136210 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1679 nt |
Genomic location |
chrX-:9371515..9373193 |
Exon number |
1 |
Exons |
9371515..9373193 |
Genome context |
|
Sequence |
000001 AGACAAGATT GGGAGCGTTC ACGGTGGTAT GACTGTAGAT TGCTCACGAC GTTTCCAGTA GCTTCTGCCG TTTTAATGCT 000080
000081 TGCTCTCTCT CTGCCCTCTG TCAAATGTCG TAAAAAATAA ATAAGGCCAA GTGCACCACG GAAGACCCTA CCAATGGCGC 000160 000161 TGAGCAGTCC AAGGTTGCTG TACTTTCTGG AGTCAGTACT CCCGAATAAA TAGCGTGAAT GTTCCCAGTC CTGCTTGCAA 000240 000241 GCATAAGCTA CCAGTGAGCT TGTTTCAGGC TGTGAGAATG GATAAGGACA GATGGAAGCA ATGGTGTTCT TCTCAGCTGG 000320 000321 AACCCGATGT GGTCAGTGTG CAGCCTGACA CTCGAAACTC ATTCATCTTC CTTTCTAAGT CCTTTCACAT GGAGTCCAAC 000400 000401 CCTTGGGCAG AACCCCAGAT TTTCTTCAGT ACTTCACATG TTCTCTCGTT GGCCTGTTCC AGATCCCTCT TCATGTTGCA 000480 000481 GCACACCAAG GCTTTGGATT CCTCCAGCAC TATTCGATTA CATGAGACAA GCTTCTTGAT CTGAGCCACC AATTTCCTGA 000560 000561 GTGAAGGTCC AGGACCCAAA CAGCTGGGAG AGAAGGCCGT TGCCAAATGC CTTCTGTGTG ATCAGTTTCA ACCCACTGAG 000640 000641 CATCGTCTCG CTTGCAGCTG GTCGTCCCAT GATTTCGGAA ACGTAATGGT AAATCAGCTG TCTGGAATCT GCTCAGAGGT 000720 000721 AGAAGAGGTT GTTGGAAACC AAGTCTTTTG ATTAGCCTAA ACCATATCAT AAAGGGGCAA TACGGATGCT CCTAGTCGAA 000800 000801 TGGCTGGGAT AGTGACTGCT TCAATAATGT TCAGTTTGAG TGAAATGATA GCCTTCACGA AGTTCCTCCC ATCCAAGTAC 000880 000881 TGAAGAGGCC GTACCCTGGG CGCAATCTCG TGTACTCTGT ACTTCAGTGA CCAGATGAGA TTGGAGCGTT CACTGTGCTA 000960 000961 TGGCCGTAGA TTATGTACGA CGTTTCTGGT AGCTTCTCTT CTGCCATTTT AATGCTTTCT CTTTTTGTAT CATATTCAGG 001040 001041 GTCGTATGGT CATAGATTAT TCATGATGTT TCAGATAACT TCTTTTACTT CAGTAACAGG TTTTTTGAAC GGAGTAATAG 001120 001121 TATTCACAAA GTTCCTTGTG TCCATGCAAT ATACAGGGCA GATACTGCTT AGCTTCTGAT ATTCGAAGAA ATCGTGCCTA 001200 001201 TTTCGGGTGG TATGGCCAGG GATTATTCAC GAAGTTTCTG TTAGCTTCTG CCTATTTAAC ACTTTCTTTT TTTCTGTCAC 001280 001281 TTTCAGAGTG ATATGGCCAT AGATTATTCA CGACGTTTCT GATAGGTTCT CCCATTTTAA TGCTTTCTCT TTTTCTGTCA 001360 001361 TCTGTCAAAC ACTGCATAAA ATAAATAAAG TCAAGTCCAC AACAGAAGAC ACTGTCAAAG GCGCTGAGCA GTACAAGCTT 001440 001441 GCTGTAATCA GCAGTGGTTG TCAGAGCTGG TAGACTTTTT TCATTACAGC TGTATTTACT GAGTTATTCC CTGTTGATCT 001520 001521 AGTGAATAAG ATGTGGGTGA AGCCATCTTT TGTCCCGGCC ACAATAACTC TGTATCCTTA GGCACTTTCT GTTTGCCTCA 001600 001601 CACTGAAATG CAATCGTTTG TTAAAAGGCT GTTCTCTTCT GTTGTCAATA AATTTCCTTT TGCTGACAGT TACTGCTGT |
Predicted Small Protein
Name | NONHSAT136210_smProtein_326:538 |
Length | 71 |
Molecular weight | 7994.0844 |
Aromaticity | 0.142857142857 |
Instability index | 72.4128571429 |
Isoelectric point | 7.77691650391 |
Runs | 7 |
Runs residual | 0.0448373408769 |
Runs probability | 0.0421808362984 |
Amino acid sequence | MWSVCSLTLETHSSSFLSPFTWSPTLGQNPRFSSVLHMFSRWPVPDPSSCCSTPRLWIPP ALFDYMRQAS |
Secondary structure | LEEEEEEEEEELLLLLLLLLLLLLLLLLLLLEEEEEEEELLLLLLLLLLLLLLLLLLLLH HHHHHHHHLL |
PRMN | - |
PiMo | - |