NONHSAT136239
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136239 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
2014 nt |
Genomic location |
chrX-:10466859..10468872 |
Exon number |
1 |
Exons |
10466859..10468872 |
Genome context |
|
Sequence |
000001 TTTCTGCATC CTTAGATTGG CCCTCCTCAG AGCACTTCCA TCAGCCACAA TGATTTCTGA ATCAAAAGAT GTGAATCAGA 000080
000081 AATGAAAGCA AAAATCATAA CCAGGAGCTG CTAGCTTCCA AACCAAACCT GGGAACTAGA AACACCAGAA CATAACTGCA 000160 000161 AGTAACCAAT AAACCCTGCC ATATTTGAAC TAATAGAAAT TAATGAGAAA GTCCAATCAA ATCGTTAATT CTTTGTTTAA 000240 000241 GTGACACATG AAACAGCAAA ACTGTGGAAA ACTTCTTTGT AGTAGAAAAA ATTCTGAAAT ATAGAATAGT ATTTAACTTG 000320 000321 TTTTATTGTA TCTTTTGGAA TATAAGAATA CTAGAGTTAC AAGAATTTGG AAATTCATCA AAGTAGAAAA CAAGATTCAA 000400 000401 CTTCCCTGGT TTCAAAAGGA AAGCTAAATC TGTATTCTCT GAAAGATCTA GGAAAAATAC TTGGCCTAAA ATGAATAGAT 000480 000481 CCTGTTCCCA AATTTCTAGG AATTTACATA TTGGGGTGAT GGTGATTGTG ATACCAGTTT TCTCAAAACA CATTTGCCTC 000560 000561 AACAAGGAAG ATTTCAGCCC ACTTTTTTGG TAAAGCAAAC ATATCCATTC TGTAAATCAA ATAGTCAAAA TTTGGATTAA 000640 000641 ATTGAGCCCC ATATTACAAT GGCAACTGGG ATACTTTTTC TACCATGCAG TAACTCAACT CCCAATGATT GTGAGAGTGA 000720 000721 ATGGACCCTA AACTAAATCA TAATCTGTTT ACAAAATCCC TTCTCAATGC AGACAACAGT ACCTCAGATT TGTCAATGGC 000800 000801 TTCATAAGTT TAGGTGTTTC TTCATATATT ATTTCATGTA TTCACCACAA TAATTCCACA CGGCTAAGAG AGCAGATATT 000880 000881 ATTCAGCTCA TTTTACAAAA TAGGAAAACT CATAAATGGA GATAGCCTAA GATTTTCCTA ATGTCACCAT GTGGGTATAT 000960 000961 TACACACCAC ATTTCATTTC ACAGCCCGTA CTCTAGAATT AGCAGTGGGT TCTCACTGGA CTTAGTCAAA GCCAGAAGAG 001040 001041 CTTGAAGTGT GGAATATGTT AGTGACAACA TTAAAACTTG AGGACCTCAC AATGTGGTCA ATTGATTTTT GACAAAGGTT 001120 001121 CTCAGACACT TCAGTGAAAG AAAGAATAGT CTTTCAAAAA ATTGTGCTGA GACAACTGGC TATCCATATA AAGTTAGAAG 001200 001201 CCTACCCTCA CACCATACAC AAAACTGACC TCAAAATGGC TCATAGACCT AAATATAAAA TATAAAACTT ATAGAGGAAA 001280 001281 ACAGAACAGT AAGTCTCCAT GACCTTGGGA TAGGCAATGG TTTCTTAGGT ACGACAACAA AAGCACAAGT AACAATAGAA 001360 001361 AAGTAGATAA ATTAACTTCA TTAAAATTTA AAAATGTTTT GTGCTTTAAA GGGTATCATA AAGAAAATGC AAAGATAACC 001440 001441 CACAAAACAG GAGGCAATAT TTGCAAATCA CATATTTGAT AAGGGACTTG TATTCTGAAT ATGTAAAGAA ATAATACATT 001520 001521 CTATTAATTA AAAGACAATG ACCCAATTAC AAAAGGAGCA AAAGATCCGA ATAGTCATAT CTCCAACATA GATACACAGA 001600 001601 TGTCCAGTAA GTTCACGAAA AAGATGGTCA ACATCATTAG CCATCAGGAA AATGTAAGTC AAAACCACAA TGAAATACCA 001680 001681 CTTCACACCC ACTAAAAATA AAATAAAATT AAAAAGACAT ACGATAACAA GCATTAACAA GGATGTGGAG AAATTGGAAC 001760 001761 CCTCATGTAT TTCTGATGGG AATATAAAAT AATGCAGCCA CTTTGAACAA TAGCTTGGCA GTTCCTTAAA ACATTAAACA 001840 001841 CAGTTATGTG ACCCAGCAAT TCCACCCCTA TATCAAAGAA AAATGAATAT ATATGGGCAC ACAAAAACTT GTACATGAAT 001920 001921 GTTCATATCA ATATTATTTA TAGTGAACAA AAACTAGAAA CATCAGTGTG CATCTATTAA AGAAGAGATA AAAAGTGGCC 002000 002001 TGTTCATACA ATGA |
Predicted Small Protein
Name | NONHSAT136239_smProtein_470:592 |
Length | 41 |
Molecular weight | 4660.5104 |
Aromaticity | 0.1 |
Instability index | 90.1925 |
Isoelectric point | 8.88702392578 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0395815984051 |
Amino acid sequence | MNRSCSQISRNLHIGVMVIVIPVFSKHICLNKEDFSPLFW |
Secondary structure | LLLLHHHHHHLLLLLLEEEEEELLLLEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |