NONHSAT136254

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT136254

Source

NONCODE4.0

Same with

,

Classification

overlapping(AS)

Length

6123 nt

Genomic location

chrX-:11108271..11150108

Exon number

2

Exons

11108271..11111418,11147147..11150108

Genome context

Sequence
000001 ATCGGAACAT AATTCCAAAA TGTAAAATAA GGTAAAACTG TACCTTGCTC CATCCCAGGG AGTATGAGCA ATGTTTATGA 000080
000081 TATGCAAAAC CTGTTCCACT TATTTCCTTC CATACTTTTC TTCCTGTGTT TCTATTTCTG CCATCATATT TTTTTGTATT 000160
000161 CTTATGTCTG AGTCACTGTT TCTCTGGCAT TATCTTTTAG TGTGTGCTTC TCTTACTGCT AGAGTCTGAG TGTTGGTGTC 000240
000241 CCCTCAAAAT CCATATATTG AAACTTAACC CGGAAGGTGA TGGTATTAGG ACGTGGGAAC TCTGGGAGGT GATGAGGTCA 000320
000321 TGAGAGTAGA GCCCTCATGA ATGGGATTAA TGCTCTCCAA AAGAGGCTCC AGCTCCTTCG CCCCTTCTGC CATGTGAGGA 000400
000401 CTCAGTGAGA AGGCACCGTC TATGAAGCGG GAAGCCCTCA CCAGGCACCA AATCTGTCAG TGCTTTGACC TTGGACTTCC 000480
000481 AGGCTCCAGA AATGTGAGAA ACACATTTCT GTTGCTTATG AGCCTCCCAG TTTATGGTGT TTTGTTATAG CAGCCCCAAC 000560
000561 AGACTAAGCC ATTTGCTTAG TTCCAAGATC AAATGTAATG TTGGGCAATG AATGAAAAGG AGAACAGAAC CCTCAAATGT 000640
000641 CCAGTAGGGG AAGGCCAAAG CTGTTTCTTG TTTCTGCACA AAGGAGATGA CTTCATTTCC TTAGAAGGTA AATGAATTAG 000720
000721 AGAAGGGATT AGAAACAGGC TTTTTTCTGC AGGAAAGAAA CATAGAGGGT CAGTGTTCAG TGTCTTCTTC TAGTCATATC 000800
000801 CCTTTACTTG GTCAGACACC AAGGGTCTGG GCCCAGGATC TGCTGGGGAA AGTCAATCAT GAAAGGAACA TTGGGACAGA 000880
000881 TGAGCCACTT GGCTCTTTTT CATTCCTGAT GCTTTGCAGG GGATCAGACA ATTATCTTGC CCTCCCCCTC TTCTCTCACC 000960
000961 AAGAGACTTC CATCAGAGGC ATGCATGAGC TGCTCATGCA GTCTGTGGAA GGGCCAGGAG CACATTGAGC TTCGCAAAAG 001040
001041 GGTGAAGCCT TCTGGGTTCA CCCTTTTGCC AATACAGGGG CCAGACCACA CTGGTTTGCA ATGTCATGGC CCAGCAAAGT 001120
001121 GTGCAAGTGA GCACAAGTGG AGCAATTCAG CAGTGACAGG TACCAGATAA ATGAGCTGGC CTGACCCTGG ATGAATTTCT 001200
001201 TCACAGTCAT TCTGAAAATG TGAGTGTTAA GTGTTGAATT GTGTTCCCCT CAAAAATGTG GAAGTCCTAG CCCCCAGTAC 001280
001281 TTGTGAATGT GATCTTATTT GGAAATTGAG TCTTTGCAGA TGATCAAGTT AAGATGAGGT CATTAGGGTG GGCCCTAATC 001360
001361 CAATATGGCT GGTGTCCTAA AAATCAAGGG GATGTTGGGG CACAGACACA GACACACACA GACACAGACA CACACACACA 001440
001441 CACACGTGCA TGCAGAAAAC ACCATATGAA GACTGGAGTT ATGCTGCCCG ATGTGAAAGA AATCCCAGAA GCTGGGAGAA 001520
001521 AGGCCTGGAA CAGATCCTTC CCTAGAGCCT TCAGAGGGAG CATGTCCCTG CTGACACCTT GATCTTGGAC TTCTGTCCTC 001600
001601 AAGAACTGTG AGAGAATAAA TTTCTGTTGC TTATGCCACT ACATTTATGG CCCTTTGTTA TGGCAGCCAC AGCAAACTAA 001680
001681 TGTGTTGAGC AAAGGTCAAG TAGCAGGAAT CACCCAGAGC ACCTTTCCTT CTCCAGTGAG TGCTACCAAG AAAGCGTTTT 001760
001761 CCTTTTGAGA CAACAATTCT CATAGAAGCA GCGTACACTA AGAGGGACCT TCTGTTACCC AGTCTGGGAG GCTGTTGTCT 001840
001841 TCACCCCATT ATCTTCCTGC CCCCACTATC ATCACCTACA GAAGTCATAT GAAGAAATGA ACTTTCAGAG GAAAGCTTTT 001920
001921 CATTATTAAA GCAAAACAAA GGTGTAATCA GGCAACATTC AGAAGTGAGG GGAGCAGGAG GACTTAAAGA AGAAATGGAA 002000
002001 AATAAGCAAA ATTGGGGAAG TGGCATTTAC ATTTAAGATT TGCTTTTGCA TCTTCTGCAT GGGAACTTCG ACCCACGGCT 002080
002081 ATGTGACTAT GAGGCAACTG TAAATGCATC ACAAAGATGG GGGTGGATGG AAGCTCAAAG GATTCAAAAG ATGCCAGAGG 002160
002161 AAAGTGAAGC TCAAATTGGG CCCCCTGGCC CAGCAGCATC AGCATCTCCT GGGAGCTCGT TAGAAACAAG AATTCTCAGC 002240
002241 CGCCCCAGGC ATACAGGATC AGGAATTCTG GGTGGGGGCC CAGCCATCTG CGTTTTAACA AGCCCTCTAG GGGATTCTGA 002320
002321 TACATAGTAC ACAAAAGCTT GAAAAGCATC TTGCTGGGGA AACCACAAAA GGGAGAGAGG TGGAAGGGGA AAGGCAGCAA 002400
002401 GATCCAAAAT GCTGTTCTAA GGCAATGCTT GGCCTGAACA ATGTCAAATC ATACTTTTAA AAAAATCCAG CTGAAACTAG 002480
002481 AAATCATAAA ATGATCACAT GTTACATTTT ACCTGAAAGC ATAAATGTAC ATCATTTACT AATCTTTCAA CAAGGAGCCA 002560
002561 AGGCCTTTTG CATCTCTGGG TGCGGTGGGT CAGCAGTGCC ACTTCATCCT TCTTACTAAT GCACAGTGGA TGAACCACAT 002640
002641 CCACTGTGCA TCATCTATTC TTCCAGTTCC AGGGCTTTTT TTTTTTTTAA CAGCAAATTT AAGAAACGAC TACAAAGCAG 002720
002721 TGAGTGAAAA ATTATTCTGA TTTTTATGAT ATTTTCTAAA CCCCTTCCAG TTTCATGGCA ACATTTTTTG GGATTCTCCT 002800
002801 TCAAAGCCTT CCTTATCATT CATTAGTCTT TATATACTTG GCTTATGCAT TTACATTGCA TTGTCTGTTG TTTTGGTTAA 002880
002881 TTAAAATAAT TACGTTACTG GCTCATGCTA AGCCGGCTGC TCAACTAGGA GGATGGGGAC CTCCTGGCTG TAGGGATCAA 002960
002961 CCTGCACTCT AGCCTGGGTG ACTGAGCAGG ACTCTGTCTC CAAAAAAAAA AAAAAAAACA ACAACAATGG AAAAAAACAA 003040
003041 ACAAAAAAAC TTTTGGAAAA AAATCGGGAT AACTCATTAA AATTAAAGGA AATAAAATGA AAGATAGCAG TTGGGTGTAT 003120
003121 CAAGGCAGGA TTTAAAGGAA AAATGTTAAT TTTTACTTTA ATCAATTTTT AGCTATTTTA TCTATTATCA GTCATGTGAA 003200
003201 GTGGGAAAAT TATATTTCTT TTTCTTTATG AGACAATATT TATTCTGTTT ATGATTATGT ATCCCAATAA ATATAAGTCC 003280
003281 CAGCATCATC CATGAAAATG GCTACTGATT CAAAAGCTTG ATTCCTTGGG CTAGACACTG GAAGACTCAA AAGTCCCAAA 003360
003361 GGAAATCAGT ATTCTCTTTG TTTTATTTAT TTTGTTTTAA CCTCATGGGT ATCTATAGGT GAAGTTTGGC ATATAATATA 003440
003441 TTTTTTATTT CTTGTGAACC AAACTTCATT TAATAATAGA TAATAACAAT AGCTAACATT CATTGATTAA AATGTGTTAG 003520
003521 GGCCTTATTA ATTACTTTAT ATTAATTTTT ATTTAATTAT CGTAACAACC TGATGATATA GGTACGGTTA AAGTATAATT 003600
003601 TTTAACAAGT TAAAAACATG AATGTCATAT ACATACGGAA TGAAAACATT CCAAACAGTC ATTTAACTCA TTAATGATTG 003680
003681 GAACCATTAC AGAATTAAGC TAATTCCAAG AGCATTTTGA GGAATCTGGT ATTTATAGAC ATTTTGAGGG AAAAAAAAGT 003760
003761 GTTGAATAAG ATTTTGAGGC TACATTTAAA ACTGGTTAAT ATCCTTCAAA GCAATAAAAC CACAGTATTT GATGTTATCT 003840
003841 TTTCTATTGG ATAGAAATTT ATGAATTAAC GTAACTTCAG TCATCTAAAT TCTAACCAAA TAGAAAATAG AAAGTCAAAC 003920
003921 ACAGGTACAT TCCCTAGATA ATGAAGTAAC TTTTAGCACC AGTCAGTGCT CTGGTAAAAT TTTGAAAGGT CATGCCGCAC 004000
004001 CCTTTTAACC TTATTCAACT TTTAGATAAT TTTTCTTGAT AAAATTATAA TTGTGTACAT TTTACCAATG AGGAAATTGA 004080
004081 TGCTTAGAGA TATTAAATAA CATGATAAGG GAATCACAGT AAGGGTAGAG CAAAAGTGGA ACCCAGGTCC TTCTGATACT 004160
004161 TTAATCCACT GTCTTATACC AGTTGAAAGC CATTTTTATC TGTCCTATAA AATTCTTTGT GTGTGTGTGT GTATTCAACA 004240
004241 TTACTTAAAA TAAATGGAAT CAATATTTGA GATTGAAAAA CCTGTATTAT ATGAAAATTT TTATTATGAT GGTATCAGTT 004320
004321 GCAGTGAGAT TTGTCCTATC AAGGATTTGT TCTGTTTTGT TTACATGTAC ATACATGCTT ACAATGGTGG AATGATGCAT 004400
004401 TCTTTGCAAG CAAACCAGAC CCCAACTAAT GGTGGGTAAA GGACTCAGAG TTAGAAGTTA TGCCGAAGAT AGACTATAAC 004480
004481 AGGATATAGT TATGCCGAAG ATAGACTATA ACAGGGCTAA AAAATGAAGG AGGGAGACAG ACTTTGACAG CAATGATCTG 004560
004561 AAGAGCCTTG ATGGAAGAAA GCTGAGAAGG AAAAAACTAC AAACACTGAA ATGTACTTAA CTCTCACCTT TTCAGTTTGA 004640
004641 AGCTGTTCAT AGTGAACTCA GCCTGTGTTC TAAATAAACA GACACCAAAA AAATCATGTG GGAGCTAGAA TGTTGACTCT 004720
004721 GGGGATTCTG AATATTGAGC TGATTTATAG TATTCCAACT CTTTGATAAA TGTCTAAAAT GTTTCAATAC TTAGGCTATC 004800
004801 TATGATTTAT TTGTATTTGA TATTAGCTTT ATGATGATAT TGTTTATAAA TCAGCATGGA TTTTGTGTGA GTTATTACAA 004880
004881 GAAAAGTTTA CTCTTCTGAT TAATTAAGGA AAGAACCACC TAACTTTGTG AAACTTCTGA CTAATCAACA TTTGAAATGT 004960
004961 GTTTGTTGGC ATGGTTTTCT AAAATAGGGA GTATAATAAA GTAGGTTAAA AGAATGTTGT ATAGTGAAGG TCCCCAAGAG 005040
005041 ATTGACCTAA TTTATTTATT GTTTAAAACA AAACAAACAG AACAAAACTA AAAATGATGG ACTTGTACTT CAGACTAGTA 005120
005121 TAGAATAACA AGGTCCAGAT TTACCCTCTT ACCTGAAATA ACACAAAAAA ACTACACAAA ATATATGAAG TAGTGATTTT 005200
005201 CAAGACACTA ATATCAGCTA ATGAAGGACA GTGGTCCTTG AGAGATGATA AATGAAGTGA ACTCTATGAC TTCCCAAGCT 005280
005281 TACTGCCTTG GGAGAATTTC CAGACCATCA TGCTGGGGAA GGGGGTCGGT GGAGCTTGAT GAACTCCATG ATATGAGGAG 005360
005361 GTGGAGCTGA GAGTCCAGGG AGAACAACAA GGCTAGAATT CACAGAAAAG AGTACCAGGG AGGAGAGAGC TGCCCAGAGA 005440
005441 TAGGACTCTG GATACCTGCA GAATATCCAT CACAGTACTG ACAGTGTATT CATGTGAGGA TGCTACCCAG AACCAGAGAA 005520
005521 ATAATGACCT GAAAGGATTA CAGGCAGTGA TATGCAGCAC TCTCACTGGC ATGGGAATAG TGCCTATTCC ACCAGCAAGA 005600
005601 CTTAGAAAAC CTCATAATTC ATGAAGCATT AGATGGTAAA CTCTGAAGGA TCTTGCCTCA ATAATGGAAG AATAATTCGT 005680
005681 TCTAAACACA ACTCTGGCCC CGCCTAACAA ATCTTAAGAG CAAGACCCAA ATGGATCAAA AAGTTAGGTA GAGACATGGA 005760
005761 AGATATAGAA AAGACCCAAT TCAAACTTCT AGAGACCAAA ACTGCAATGT TGGAGACAAA GTAGACCACA TGGGAATAGT 005840
005841 GACAGAGTAG ACATTGTAGA AGAAAAGGTT AGTGAATGTG AAGATATGTC AATAAAAGCT ATCCAAAATA AAACATACAG 005920
005921 AAAAATTGTT TAAATGAACA GCACATCAGT GATCTGTGTG ATAACTTCAC ACAGCCTAAG ATATATGTGC AATTGGATTC 006000
006001 CCTGAAGGGG GAAGAGGGAT TATAGGAAAA AATTTCAATA CAATAGCCAA AAATATAAAA CTATAAACTC ACATATCTAA 006080
006081 GTAGGTCAAT AAACCTAAAG CATAAGAAAA AAAAAAAAAA AAA
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Predicted Small Protein

Name NONHSAT136254_smProtein_2126:2326
Length 67
Molecular weight 6669.406
Aromaticity 0.0
Instability index 72.8136363636
Isoelectric point 5.09027099609
Runs 11
Runs residual 0.0160587915079
Runs probability 0.0441698382875
Amino acid sequence MEAQRIQKMPEESEAQIGPPGPAASASPGSSLETRILSRPRHTGSGILGGGPAICVLTSP
LGDSDT
Secondary structure LLHHHHHLLLHHHLLLLLLLLLLLLLLLLLLLEEEEEELLLLLLLEEELLLLEEEEEELL
LLLLLL
PRMN -
PiMo -