NONHSAT136258
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136258 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1190 nt |
Genomic location |
chrX-:11352353..11354021 |
Exon number |
2 |
Exons |
11352353..11353328,11353808..11354021 |
Genome context |
|
Sequence |
000001 GCCCTGCTCC ACTCCAGCCG TGTCCTCTAG GGGATCGCTG CCACCTTTTA CCTAGGCCTC CCCACCATGG CCTCTGCCAG 000080
000081 AGCCAGCTCC TTGTGGGCCC ATGTGGAAAT GAGACCTCCA GATCCCATCC TGGGAACCAC CAAAGCCTTT AAGAGGGAAA 000160 000161 TCAACAGCAA AAAGATGAAT CTGGGAGTTG GTGCCTACCG GGACAATAAG AGACCCCATT TGGGGACAAG CTGAATTTTC 000240 000241 CAAGGCATCT GCAGAACCAG CCTTGGGTGA GAAGAGCAAA GTGTTGAAAA GTGGCCAGTC TGTCACTGTG TGGATCATTT 000320 000321 CTGGAACTGG GGTTTAAGGG TTGGAGCCAG TTTTGTGCAA AGATTTTTAA AGTTTTTGAA GACAGAGATG TCTCTGTCCA 000400 000401 AACCACCCTG GGGAAATCAC ACACCTATCT TCAGGGTAGC TGGCATGCAA CTACAAGATT ATCAATTCTA TAACCCCAAG 000480 000481 ACTTGCAGTT TTGACTTCAC GGGTGCTATG GAGGACATTT CAAAAATACC AGAGCAAAGT GCTCTTCTCC TGCATGCCTG 000560 000561 GGACCCTCAT GCAAAGCAGT GAAAGGAAAT AATAATAGTG GCAAAGAAAA AGAAACTGCG TTCTTTGATA TGGCCTACCA 000640 000641 AGGCTTTGCC AGTGGTGATG GTAACAAGGA TGCCTGGGCT GTGTGCAACT TCATTGAACA GAGCATTAAT GTTTGTCTCT 000720 000721 GTCAATCATG TGCCAAGAAC ATGGGCTTTA TATGGTCAGT GTATGAGAGC CTTCACTGTG ATCTGCAAAG ACAGTGAATG 000800 000801 AAACCAAAAG AGGGGAGTCA GTTGAAGATC CTGATCCATC CCATGTATTC CAACCCTTCT CTCAGTGGGG CCTGTATTGC 000880 000881 CTCTACCATT CTGAACAGCC TGGGTTTGTG AAAATAATGG TTGCAAGAAG TGAAAATCAT GGCCAACTGC ATTACTAGCA 000960 000961 TGCAGACTCA GCTGATCTCC AACTGCAGTA AGGAGAGTTC CTCACACATC TGACAACACA TGACTGACTA AATTGGCATG 001040 001041 CTTTGTTTCA CAAGGCTAAA GCCTGAACAG GTGGAGAAGC TAACCAAGGG GTTTTCCATC TGTATGACAA AGGATGACTG 001120 001121 CATCCCTGTG GCAGGGATCA CCTCCAGCAA CACGGGTAAT CTTGCCTATG CCATTCACCA GGTCACCAAG |
Predicted Small Protein
Name | NONHSAT136258_smProtein_629:796 |
Length | 56 |
Molecular weight | 6181.9454 |
Aromaticity | 0.127272727273 |
Instability index | 58.5763636364 |
Isoelectric point | 4.82623291016 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0239909026674 |
Amino acid sequence | MAYQGFASGDGNKDAWAVCNFIEQSINVCLCQSCAKNMGFIWSVYESLHCDLQRQ |
Secondary structure | LLLLEELLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLEEHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |