NONHSAT136330
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136330 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
748 nt |
Genomic location |
chrX+:14891613..14911475 |
Exon number |
3 |
Exons |
14891613..14891659,14891811..14891880,14910845..14911475 |
Genome context |
|
Sequence |
000001 CGACGGCGAC AACCGCAATC ACATCCACGA CGGTGATCAT GGCAGAGAAT CACGCCCAGA ATAAAGCCAA GCTCATCTCT 000080
000081 GAGACCCGGA GGAGGTTCGA AGCTGAGTAT GTGACAGATA AGTCAGATAA ATATGATGCA CGTGATGTTG AAAGGCTACA 000160 000161 ACAAGATGAT AACTGGGTTG AAAGTTACTT ATCTTGGAGA CATAATATTG TAGATGAAAC ACTGAAGATG CTCGATGAGA 000240 000241 GTTTTCAGTG GAGGAAAGAA ATTTCTGTCA ATGGTAAGCT GTTCAATTTA ACCTTGACTG TAATATATAC TGTATAAATG 000320 000321 GTATTGTTTT ACATTTATCT AATCATGTAT TTGCACATAT TCCTAGCAGT CATCATAAAC ACCAGAATAT AATTATTTAT 000400 000401 AAAGACCCAG TAATATTTTC AAAGGAACAG CTTATAAGTC TTTTAAGTGG GATCATTCAT AAGGAAATCA GATCACCAGA 000480 000481 GAGCAGAATC ACACTCAGAT TCTTCATTCA CAGCAGAGTT TCCTAATCTG TGTTTAATTC AGTACCATTA AGCAATAGCA 000560 000561 AGACAGTATC TTtgctacta ggcctagaaa taaggagata ctgtccattt ttctcagttg ttgcctatgc ctttctctgt 000640 000641 cccCACAGTT CCTTGTGCTA ATAGGTTAAT AGGTACGCCA TATAGAATTG TTAAATGAAT GAGAGTCACC CCAAAAATGC 000720 000721 AAGCTTATCC CCAAGGAAGC CTATCACA |
Predicted Small Protein
Name | NONHSAT136330_smProtein_38:316 |
Length | 93 |
Molecular weight | 11071.2296 |
Aromaticity | 0.108695652174 |
Instability index | 44.3010869565 |
Isoelectric point | 5.35052490234 |
Runs | 13 |
Runs residual | 0.00609946825149 |
Runs probability | 0.0267144973027 |
Amino acid sequence | MAENHAQNKAKLISETRRRFEAEYVTDKSDKYDARDVERLQQDDNWVESYLSWRHNIVDE TLKMLDESFQWRKEISVNGKLFNLTLTVIYTV |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHEELLLLLLLLHHHHHHHHLLLLHHHHHHHHHHLHHHH HHHHHHHHHHHEEEEEELLEEEEEEEEEEEEL |
PRMN | - |
PiMo | - |