NONHSAT136390
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136390 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1535 nt |
Genomic location |
chrX-:16870675..16876926 |
Exon number |
3 |
Exons |
16870675..16871965,16875717..16875832,16876799..16876926 |
Genome context |
|
Sequence |
000001 TAAAATCAAT CACGAAGGAG AAGTAAACCG TGCTCGTTAC ATGCCGCAGA ATCCTCACAT CATTGCTACA AAAACACCAT 000080
000081 CTTCTGATGT GTTGGTTTTT GACTATACAA AACACCCTGC TAAACCAGAC CCAAGTGGAG AATGTAATCC TGATCTCAGA 000160 000161 TTAAGAGGTC ACCAGAAGGA AGGCTATGGT CTCTCCTGGA ATTCAAATTT GAGTGGACAT CTCCTAAGTG CATCTGATGA 000240 000241 CCATACTGTT TGTCTGTGGG ATATAAACGC AGGACCAAAA GAAGGCAAAA TTGTGGATGC TAAAGCCATC TTTACTGGCC 000320 000321 ACTCAGCTGT TGTAGAGGAT GTGGCCTGGC ACCTGCTGCA CGAGTCATTG TTTGGATCTG TTGCTGATGA TCAGAAACTT 000400 000401 ATGATGTAAG GTGGAAAATT CAGTGGGATC TTGTTAAATG GGTGACCTGA ATGACCATCA GTGATTGCTG CAGGCTGTAG 000480 000481 TTTGATTTTT TTTTTTTAAG TTATGGCTTT AAAAAACAGC TTTAggtagc ttactcctgt aatctcaata ccttgggaag 000560 000561 ctgaggcagg aggattgctt gagaccagga gtgtgagact ctacacaaaa tttaaaaaca aaaaattagt tgggtatggt 000640 000641 ggtgtgcacc tgtagtccta gctactcagg aggctgaagt gggaggatca cttATTATTT AGAAAAAAAG AAAACTAGGT 000720 000721 ATGGACATGT GAAGGAACAT ACTTGGTGTG GTGGTAAATA TCAAAATTGA GATCCAGAGT GATGCCAGTT GGAGGTCGAG 000800 000801 GAGGAAAATG ATTTCATCAA GGTGTGGCCA CAGGGCTTCA TTCACTTATA ATCTTATAAA GAAATACCTG AGGCAAATGT 000880 000881 GACAAAATAC TGGGCATTTG TCAAAACTAG TTTTAGGTAT CAGATTGTGA CATTATTCTC TACATAGTCT GTATTTTGTG 000960 000961 TACACTTGAA ATAGTTGGTA ATTAAAATAG GAATCTAATT TAAAAAACAG GACTAACAGC CCTAGCTTGT TCTCTGTAGG 001040 001041 TTTCGAATGT ATCATTTAGT GGTCGAGGTC TGAATCACCA GCTGTGTGGT TGGTTTCTTC ATGAAGGGGA GCACATAGTG 001120 001121 GAGCTAGTTG TGGAGTGCAG TGACAGTGAT GTGAGGCCGA ATGTGAGTGT GTCATCCCTG GGTGCCGTGT GCCTTTACCT 001200 001201 TTGTGTTTTA GATGGGACAC CAGGTCCAAT ACCACCTCCA AGCCGAGTCA CTTGGTGGAT GCGCACACTG CCGAAGTCAA 001280 001281 CTGCCTCTCA TTCAATCCCT ACAGCGAATT TATTCTAGCC ACCGGCTCTG CGGATAAGGT TTCGAAGTTT TTGCATTATT 001360 001361 TGGTGTTTAT AAAACCCAGT TCTCTTGTGC CTTAATCAGA TATTTGAAAA TTCTTAGGTA AAGCATAGAA ATCATTTTCA 001440 001441 CTTGTTATTT TTCTTTAGAC CGTAGCTTTA TGGGATCTGC GTAACTTAAA ATTAAAACTC CATACCTTCG AATCTCATAA 001520 001521 AGATGAAATT TTCCA |
Predicted Small Protein
Name | NONHSAT136390_smProtein_1211:1336 |
Length | 42 |
Molecular weight | 4607.2444 |
Aromaticity | 0.0487804878049 |
Instability index | 66.1536585366 |
Isoelectric point | 8.65997314453 |
Runs | 8 |
Runs residual | 0.0191530749663 |
Runs probability | 0.046921921922 |
Amino acid sequence | MGHQVQYHLQAESLGGCAHCRSQLPLIQSLQRIYSSHRLCG |
Secondary structure | LLLLEEEEHHHHLLLLLHHHHLLHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |