NONHSAT136475
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136475 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1208 nt |
Genomic location |
chrX+:22026660..22027867 |
Exon number |
1 |
Exons |
22026660..22027867 |
Genome context |
|
Sequence |
000001 TGTGTGGCAG AAGGGAGGGA TGAGAGTGGG TTCAAAGACT TGAATTAAGG CAAAGAGCCC CACATTGTAA TATTTCAGAT 000080
000081 TTGAAAATAG GATCTGATTA AAAAGGTTGT CCAATTAGTT TTACAAGGAA AGTGACCGAG GACTTCAAGA GGTTCTGTTG 000160 000161 GAACAGTAGT TATCCTGCTT TCTAGAAGTA GGACTTggcc gggcatggtg gctcaggcct gtaatcccag cactttggga 000240 000241 ggccgaggcg ggcagatcac ttgaggtcag gagttcgaga ccagcctgac caacatggtg aaacgctatc tctactcaaa 000320 000321 atacaaaaaa attagccagg cctggtggtg ggtgcctgta atcccagcta ctcaggaggc tgaggcaaga gaatcacttg 000400 000401 aacccgggag acagaggttg cagtgagccg agatcacgcc actgcactct agcctgggca acagagtgag actctgtctc 000480 000481 aaaaaaaaaa aaaaTAGAAG TAGGACTAGA AAAACTAGGG cagtgcttct gaaacttgag tgcacgtgaa aatcacgtga 000560 000561 ggatcttgtt aaaacagtct gattcagtag ttcgggagta gggcccaaga ggcagcattt ctcacagtct aattagtaga 000640 000641 tgttgatgct gccagtatgt ggaccacact ttttgagtaT TACTGAGCTA GAGTAATGGT CAAATGGAAA ATTGGATGGG 000720 000721 TCACATTGCA GAAAAATGAA GACAGCTGTT GCATGAACCA CTGCTTAATT TAAATGTAAA TATCAATGTA CTGCTCTAAG 000800 000801 TGGCCGTGAA AGCAATAGGT GTTGCCATAG TAATTGCTAA AATGTGTGTC TGATTTCCAA GGGTTGGAAA TTTTCTCATG 000880 000881 TATATGATTA AAAAGCCAAT TTGataccac ccaaagcaat gtatagattc aatccaatca ctaccaaaat accaatgaca 000960 000961 ttctcaacag aaataggaaa aacgatccta aaatgtatat ggaaccacaa aggaccccaa atagtcaaag caatcctgag 001040 001041 caaaaagaac aaagctggag gcatcatact actggacttc aaaatatact acaaagctgt agtagccaaa acagcatggt 001120 001121 actgacataa aaacagacat caaccagtgg aacagaatag agaacccaga tggccgggca cagtggctca tgcctgtaat 001200 001201 cccagcac |
Predicted Small Protein
Name | NONHSAT136475_smProtein_992:1129 |
Length | 46 |
Molecular weight | 5233.7234 |
Aromaticity | 0.0444444444444 |
Instability index | 123.775555556 |
Isoelectric point | 6.69805908203 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0276831453303 |
Amino acid sequence | MYMEPQRTPNSQSNPEQKEQSWRHHTTGLQNILQSCSSQNSMVLT |
Secondary structure | LLLLLLLLLLLLLLHHHHLLLHHHHHHHHHHHHHHHLLLLLEEEL |
PRMN | - |
PiMo | - |