NONHSAT136708
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136708 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1550 nt |
Genomic location |
chrX+:40715245..40731295 |
Exon number |
2 |
Exons |
40715245..40715961,40730463..40731295 |
Genome context |
|
Sequence |
000001 TATAATTTTC CTTGAGGCCA TCAATAGATG GGCAAGAGAA GGAAAACAGG CTTTACCTGG CTCACAGGCA CCTGTCAAAG 000080
000081 AACAAAATTT CAGCAAATTG AGTTTTTAAA GATGAATTGG CTTTTATCAG TGATTCATGA ACTGGGCAGC ATCAAGTCTA 000160 000161 CAAAATAGAA AAAAGCTCTA ATGAGCTGAG AAGAGTGGGT GGGCTTTATA GGCAGAAAAG GTTGAAGAAA ACAGAAACAA 000240 000241 GGGACAGAGA GTTGGTTATT TCAGTTACTT TCCTTATAGG GAATCATGTT GGCTTAGTGG GTTTGGGCTA TCATCTTTCT 000320 000321 CCTGATTCTT TGGAAGGTCA GATCTTACAC AAGTAAACAG CTTAGGTTTC AGTTTGGTGA TGTGGAACCC TAGCATGAGT 000400 000401 GATTCCATTT TGAGTTGATA TGTTGGAGCC TAGTGCAGGA GCTCAGTCCA AATCAATGGC TTCCCATAAA TTTTATTTAA 000480 000481 CACACCTATG CAAAATAGGG CAGACCTGGG GACAGAATAG TCTTTGTTTA GACTAAATGT TTGTGTCCCC TCAGAATTCA 000560 000561 TATGTTGAAA TCCTAACACC CAGTGTGATG GTATTAAGAG GTGGAACCTT TGGGAGATGA TTAGGTTATG AGGACTCTGC 000640 000641 CCCCATGAAT GGGAATAGTA CCCTTATAAA AGAGACCCCA GAGAGTTCAC TTGCCACTCA TGCCATGTGA GGACACAATT 000720 000721 TTCTTTATCC AGTCCACCAT TGATGGGCAT CTAGGTTGAT TCTATACCTT TGCTATTGTG AATAGTGCTG CGATGAACAT 000800 000801 ACAGGTCCAT GTATCTTTTT TTTATAGAAT GATTTATTTT CATGATTTTT TTTTAAGTGG AAAGAAAGGT TAAGTTTCAG 000880 000881 TAGGCTTGAG TGAATGTTAA AGCATCAACT TGTGTATTCA CTGGGACAGT CCCTCAATTA TGACTGTACA AGTTGCTGAT 000960 000961 GTCCCATGAG CAAAATTACC TCTGTGTCCA GGGACTTTCC TCCTGATTGC AGCTGAAGCT ATAAATATTC TCACCTCTAC 001040 001041 CCCTGCATCA TTGCTGGGCC CACCCCTGCT CCTTTTCCCT TCGTCTTTCT GTCACTGCTG GGAAGCCCCT GCCTTTGCTC 001120 001121 AGACTTCTGG ATGCCTTCCA ACTCATTTTC CTGTCCTGCA CACTCCAATC CCCCATGGTG TAGGAATCCC CACTTCTGAC 001200 001201 AGTAGAGCAC AGTAGGGAGG AGAGAAGGTG AGCTGAGTTT CTGTTCTCAC AAGAAAACTT AGAGTGGATT TTCACCAGGA 001280 001281 AATAACACTC TACCAAGTAA CTGGTTCTTG ACCATCATTA ATACTAGCGT CTCATTTCCT GTGGGTGGCG TGGGCTCTGG 001360 001361 TGGTGTGCTT AGGAACCAGT CATTCATATA GAACTGAAGA AAATCTGTTC TGAATTCTAA GACAGATTTT CCAACAAACT 001440 001441 TTTGGATCAA TACCAAGTTT TAAGTTGTCA GTTCCCTATA AAGCCCTAGG GGTGCCTAGC TTAGCTAAAG GGAAAGAATT 001520 001521 CAAGGTTTCT GTGGGTGAAG TAAGACAGGG |
Predicted Small Protein
Name | NONHSAT136708_smProtein_419:535 |
Length | 39 |
Molecular weight | 4182.7798 |
Aromaticity | 0.0789473684211 |
Instability index | 43.4107894737 |
Isoelectric point | 7.83648681641 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0485426603073 |
Amino acid sequence | MLEPSAGAQSKSMASHKFYLTHLCKIGQTWGQNSLCLD |
Secondary structure | LLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLEELL |
PRMN | - |
PiMo | - |