NONHSAT136768

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT136768

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

732 nt

Genomic location

chrX+:43056267..43069851

Exon number

2

Exons

43056267..43056624,43069478..43069851

Genome context

Sequence
000001 atattctaag gaaagaatca ttcttatttg tgaagacaaa aggacacaga gggaaatatg aactaaattt ttgctgtgtc 000080
000081 ctccacttta ctacccttag ctcatacccc ctttgtctta tatttctttg tgactctcca ctcttcatca aatacagtgt 000160
000161 taaaaacact caggtttaat cacttatttg ggtcttcatt tccttattaa agctctcacg gcatgtaaag cttatatttt 000240
000241 taaaatgtgt atgcttctct tttgtctttt atatgctttt ctctgtcttc tgttacagac gccacaatca agaactcaga 000320
000321 agggtagaag aaaaagatag tttcccttcc ctacaCAGGG TCCATGCATT CAGTGGAGTA ATGATTCCTG TCCATGAAAA 000400
000401 AAAAAAAAGA AAGTAGAAAA TTTCAGAGAA GAGAAAAATT TTCCACTTGG GAGCAAGGGC ATGAGGGCAG CGGGGAAGTG 000480
000481 GTAGATATAC TGACATGTTA ATATATTAGG TCTTGTATTT CTTTTGTACA TAGTCTTTCT TCTTTGACTG CCTCGTTCAT 000560
000561 GCATCTCCAC TACTTGAAAA ATTATTTAAT TTACAAGCAT GTGCCAAAGT CCTACATCAT GCTTCCTCTA AGATTCTATG 000640
000641 CAAGCCAATT CAAAGGTTTC TCTCTTAAAA ATATTTGTAT GAAAAAAAGA CATGGCTAGG AAATCACTGT TCAGTAGGAT 000720
000721 AAAATAAAAG TG
[back to top]

Predicted Small Protein

Name NONHSAT136768_smProtein_272:415
Length 48
Molecular weight 5754.6809
Aromaticity 0.106382978723
Instability index 75.9425531915
Isoelectric point 10.2809448242
Runs 10
Runs residual 0.0464893617021
Runs probability 0.0491520932697
Amino acid sequence MLFSVFCYRRHNQELRRVEEKDSFPSLHRVHAFSGVMIPVHEKKKRK
Secondary structure LEEEEEEELLLLHHHHHHHHLLLLLLHHHEELLLLLEEELLLLLLLL
PRMN -
PiMo -