NONHSAT137039
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137039 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2001 nt |
Genomic location |
chrX-:50331932..50333932 |
Exon number |
1 |
Exons |
50331932..50333932 |
Genome context |
|
Sequence |
000001 TTTTGTGCTA AAAATATACC ATATAAAAAA GTGAAAAGAC AAGCAACATA ATATTAGGAG AAAATATTTG CATATCAGAT 000080
000081 ACTTCAAAAT ATGAAAAGGA CTCTTACAAC TCAATGATAA AAATAACCAA TTAAAAATGG GTTAACAGAT TGTAATAGAC 000160 000161 ATTTCTTCAA AGAAAATATG TGTTTTAGTA TGCTTGGGTT GCTATAACAT ACTACCATAG ACTGATTGTC TTAAATAACA 000240 000241 TTTATTTCTC ACAGTCCTGG AGACTGGGAA ATCTGAGAGC AAGATGCCAG CAGATTCAAT GCCTTGTGAG GGCCCACTTT 000320 000321 ATGGTTTGCA GATGGCTACC TTGTGGCTGT GTCCTCAGCA AAGACAGAAA GGGATCTGGT CTCGGCCAGG CGCGGTGGCT 000400 000401 CACGCCTGTA ATCCCAGCAC TTTGGGAGGC CGTGGCGGGC GGATCAGGAG GTCAGGAGAT CGCAACCATC CTGGCTAACA 000480 000481 CGGTGAAACC CCATCTCTAC TAAAAAAAAT ACAAAAAAAT TAGCAGGGCA TGGTGGCAGG TGCCTGTAGT CCCAGCTAGT 000560 000561 CGGGAGGCTG AGGCAGGAGA ATGGCGTGAA CCCAGGAGGC GGAGCTTGCA GTGAGCAGAG ATTGAGCCAC TGCACTCCAG 000640 000641 CCTGGGTGAC TGAGCGAGAT TCTGTCTCAA AAAAAAGAAA GGGATCTGGT CTCTTCCCCT TCTTATAAGG GCATTATAAT 000720 000721 TTCATTATGA ATGCCTACTC TTGTGACTTC ATCTAAACCA ATTTACCTCT CAAAGGCCCC ACCTCCATAT GCCATCACAT 000800 000801 TGGGGATTAG GGCTTCAGCA TGTGAGTTTG GAGAGGACAC AAACATTCAG CTTATAGCAA TATGCAACTG GCTAGCAAGC 000880 000881 ACAGGGAAAG ATGCTCAAGC ACTACTATTC ATTAGGGAAA TGCAAATCAA GACCACAATG AGATACCACT TCATACCCAC 000960 000961 TAGAATAGCT ATATCAAAAA GCCAAACAAT AACAAGTGTT GGTGAGGAAA TGAAGAAATT GGAACACTCA TACATTGCTG 001040 001041 ATGGGGATGT AAATTGATGC AACCTCATTG AAAAACAGCT TGGCAGTTTC TCCAAATGTT AAACATAGAA TTTCCACATG 001120 001121 ACTTAGCAAT TCCATCCCTA GGTATATACC CAAGAGAATT GGAAACAGGT GTTCAAACAA AAGCGTGAAC ATGAATGTTT 001200 001201 AAAGTGGCAT TACTCATAAT AGCCAAAAAG TGGAAATGAC CCAAATGTCC ATCCACTGAG GAATGGATAA ACAAACTTTG 001280 001281 ATATATGCAT ACAGTAGGGT ATTATTTAGC CATAAAAATG GATAAAATAC TGATACATGT AACATTGATG AACCTTGAAA 001360 001361 ATATGCTAAG TGAAAGGAGC CAATCACAAA AGACCACATA TTGTATGATT TAATTTATAT GAAATGTCCC AAACAGGCAA 001440 001441 ATCTATAAAG GTAGAAAGCA GATTAGTGGT TGTCAAGGCT GGGGGCTCAG GGGCAATAGG CATGGGGTTT CTTTTGGGGA 001520 001521 TGATGAAAAT ATTATAAAAT TAGATTGTCA TCCTGGTTGT CCAACTCTGA ATGTACTGGA AACCATTGAA GTATACATTT 001600 001601 TAAATGGGTG TGCTAAATGG TATATGAATT ATTTCTCAAT AAGTGTGTTT TTTTAAAAAA GCTATTGATT ATTTCCATCA 001680 001681 GTCTCATTCC TCTTGACAAA AATCTGAGTT GATGGTGAGC ATGTACTTCA TTCCTGACTC CAAAGGGTAC AATATTTACA 001760 001761 ATATTTGAAT TTGGGAGTGA CTTTACTATT ACAACCTTCC CCTTGAAGAC CTGGAAGACC CAGCAACATA AGGACAAACA 001840 001841 GTAGTCTCAG CCTTGTACTA AGACTTCAGC AAAAATAAGA GAGATGGGAG GGACTACTAT TGGGAAGGAG GGGCAATATT 001920 001921 TCTAGGCAAA TATTGTGGTA GAATGGATAA GAGCTTCGGC TCATTGGGCA AATAAACCAA GTTTTAAATC CTGATTCTAC 002000 002001 C |
Predicted Small Protein
Name | NONHSAT137039_smProtein_320:502 |
Length | 61 |
Molecular weight | 6377.4458 |
Aromaticity | 0.0666666666667 |
Instability index | 51.5433333333 |
Isoelectric point | 9.05645751953 |
Runs | 11 |
Runs residual | 0.0335992907801 |
Runs probability | 0.0439048674343 |
Amino acid sequence | MVCRWLPCGCVLSKDRKGSGLGQARWLTPVIPALWEAVAGGSGGQEIATILANTVKPHLY |
Secondary structure | LEEEELLLLEEEELLLLLLLLLLLLELLLLHHHHHHHHHLLLLHHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |