NONHSAT137157
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137157 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1275 nt |
Genomic location |
chrX-:53188008..53205813 |
Exon number |
3 |
Exons |
53188008..53188988,53192445..53192581,53205657..53205813 |
Genome context |
|
Sequence |
000001 ctttctcagg aaaccaacca tcaggcctcc cagagagaat cgaggaactg aaatctccca tatcaccaca tccagacaat 000080
000081 gagacatggc tgctgcctgt tgacaaactc ctcttcttta tacctcccga atttctgttt tcctgcatat ggttacgtcc 000160 000161 aataggtcag cggcatagtg gcgccccaga acagggactt cgaggacgtg aacgaaggtc tgctggagca gaggaactga 000240 000241 atttgacaag gcaaacgggg accccaggac gagtctgccg gcagtggata taaggagatg gacaaactgt gcgtgcgacc 000320 000321 atggaacggg agactggagg aacctatggt ggccaaccat gagcccggtc cctccggtac gagccatgag ccagctgagc 000400 000401 ctgagtgcaa agatggagag agggccgata ggagtcacga caCAGCTCTA ATGCTACATT Ttctgtaaaa ttcgatggac 000480 000481 caccaattgg atagtaagag ctgcccagcc tggacttaca ttctttcaat taatacataa aacaaaaagg gggatatgca 000560 000561 gggagccgaa ggcccgtggg acgtgaccag ctcagcattt cgctggaggc tatatgatca aacagcaaac tgtttatcat 000640 000641 gaatgcagga tgtgggcaaa ctcacattgt cctgccacca aaacgtttgc tgagggacat cattccctga tggctccttg 000720 000721 aagttatcta cggagaaaat tagcgcctat tgttcaaagc atgtagttca aagcctgctg tgaaccaaac agctgactga 000800 000801 caattacccg acaatcaccg cccccaaccc cgctttttcg ctatctcttt tgcctaataa atatggaggg ctgtgtaaac 000880 000881 cagggccctt gtccactaga ggcaaggttc cccctgaccc cttcttccaa atatactctt ttgcctcttg tcttttattc 000960 000961 ctgcgttcgc ccccctttgt tcaatccAAA CGTGGAAGGC AAACTATTTA TAGCTCAGTA TATATGTGCT TAAGTCTGTG 001040 001041 TGAACAGAGA AATGCCTCCC GCAGTGTTTG AAAGTGTTAA GCTGATAATG TAACTAACAA TTGCAGAGAG AACAAACGTT 001120 001121 CAACTTGCCA TACACCTCAA ATTTGGAGAA ACAGAGTTAA TTTGGGCAAA TCTACAAGTT CTGTTTTCGT TCCTATATTA 001200 001201 TCATTGTTGT TTAATACTCA CTGTACTTGT AGTTGAGACA AATAGGTGCT ACTGAATTTT ATACTCTATT TTCTT |
Predicted Small Protein
Name | NONHSAT137157_smProtein_638:709 |
Length | 24 |
Molecular weight | 2543.063 |
Aromaticity | 0.0 |
Instability index | 63.0217391304 |
Isoelectric point | 9.49664306641 |
Runs | 5 |
Runs residual | 0.0103519668737 |
Runs probability | 0.0492139198021 |
Amino acid sequence | MNAGCGQTHIVLPPKRLLRDIIP |
Secondary structure | LLLLLLLEEEELLLHHHHHHLLL |
PRMN | - |
PiMo | - |