NONHSAT137187
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137187 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
556 nt |
Genomic location |
chrX-:53458206..53459270 |
Exon number |
3 |
Exons |
53458206..53458542,53458922..53459064,53459195..53459270 |
Genome context |
|
Sequence |
000001 CGCGGTGGCT AGCAAGACGT ACAACTTAAA GAAGGGCCAG ACCCATACCT TGGAAGACTT CCAGCGAGTT CTTGATGTGA 000080
000081 ATCTCATGGG CACCTTCAAT GTGATCCGCC TGGTGGCTGG TGAGATGGGC CAGAATGAAC CAGACCAGGG AGGCCAACGT 000160 000161 GGGGTCATCA TCAACACTGC CAGTGTGGCT GCCTTCGAGG GTCAGGTGTG TGGGCAGGGG TCTGTTTGGC ACCCCACTGC 000240 000241 TGACCAGCCT CCCAGAGAAA GTGTGCAACT TCTTGGCCAG CCAAGTGCCC TTCCCTAGCC GACTGGGTGA CCCTGCTGAG 000320 000321 TATGCTCACC TCGTACAGGC CATCATCGAG AACCCATTCC TCAATGGAGA GGTCATCCGG CTGGATGGGG CCATTCGTAT 000400 000401 GCAGCCTTGA AGGGAGAAGG CAGAGAAAAC ACACGCTCCT CTGCCCTTCC TTTCCCTGGG GTACTACTCT CCAGCTTGGG 000480 000481 AGGAAGCCCA GTAGCCATTT TGTAACTGCC TACCAGTCGC CCTCTGTGCC TAATAAAGTC TCTTTTTCTC ACAGAG |
Predicted Small Protein
Name | NONHSAT137187_smProtein_134:409 |
Length | 92 |
Molecular weight | 9946.3895 |
Aromaticity | 0.0659340659341 |
Instability index | 42.2736263736 |
Isoelectric point | 7.83782958984 |
Runs | 15 |
Runs residual | 0.0313644688645 |
Runs probability | 0.0451745863511 |
Amino acid sequence | MNQTREANVGSSSTLPVWLPSRVRCVGRGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDP AEYAHLVQAIIENPFLNGEVIRLDGAIRMQP |
Secondary structure | LLLLEEELLLLLLLLLEELLLLEEEELLLLLLLLLLLLLHHHHHHHHHHLLLLLLLLLLH HHHHHHHHHHHHLLLLLLEEEEELLEEEELL |
PRMN | - |
PiMo | - |