NONHSAT137204
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137204 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
797 nt |
Genomic location |
chrX+:53747493..53751995 |
Exon number |
3 |
Exons |
53747493..53748149,53748218..53748291,53751930..53751995 |
Genome context |
|
Sequence |
000001 ttttttttct ttctttcttt tttttttttt tttcagaaac gaggttgccc agctctggct gctctgttgc ccagccggga 000080
000081 atgcagtggt gcaatcaagg cttactgtag ccttgacctc ctgggttcaa gggtcccacc tcagcctccc aagcagtggg 000160 000161 actgcaggcg cacaccacca cgcctggcta attaaaaaaa attttttttt tgtagagatg gacatctcgc tatgttgccc 000240 000241 agactgatcc ctaattcctg gcctcaagtg atcctcctgc ttcagcctct caaagtgctg ggattgcagg taccagccac 000320 000321 tgtacctggc cagtaattca ttttattact gagtagaatt ccactgtatg aatgtatcac aatttgctta ttaattcgcc 000400 000401 tgctgaagga cctttgtatt gttttcagtt cagggttatt aaaaataaag tggccatcaa cattcttgta caagtcttca 000480 000481 tatggaaaca tagtactttc atttctcttg ggtaaattct taaaaataga acggtcaggt ctttagccct ctccctcccc 000560 000561 ctccccctcc ccctctcccc acgttctccc tctccctctc cctctctctc cacggtctcc ctctgatgcc gagccaaagc 000640 000641 tggactgtac tgccaccgcg cgcgccacca cgcctgactg gtttccgtat ttttttggtg gagacggggt tttgctgtgt 000720 000721 tggccgggct ggtctccaag ccatttcaga agacttccag tccacccctc ccatcacagg cccagagggc tagggag |
Predicted Small Protein
Name | NONHSAT137204_smProtein_371:514 |
Length | 48 |
Molecular weight | 5464.4519 |
Aromaticity | 0.148936170213 |
Instability index | 50.2255319149 |
Isoelectric point | 9.51556396484 |
Runs | 9 |
Runs residual | 0.0252127659574 |
Runs probability | 0.0316002276786 |
Amino acid sequence | MYHNLLINSPAEGPLYCFQFRVIKNKVAINILVQVFIWKHSTFISLG |
Secondary structure | LLLLEEELLLLLLLLEEEEEEEEELHHHHHHHHHHHHHHHLLEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooo |