NONHSAT137347
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137347 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
917 nt |
Genomic location |
chrX+:64956768..64961266 |
Exon number |
6 |
Exons |
64956768..64956787,64957040..64957200,64958387..64958479,64958832..64959056,64959591..64959844,64961103..64961266 |
Genome context |
|
Sequence |
000001 gactaagaag gCTCAGCAAG AACTGGAAGA ACAGACCCGT AGGGCTCTGG AACTTGAGCA GGAACGGAAG CGTGCCCAGA 000080
000081 GCGAGGCTGA AAAGCTGGCC AAGGAGCGTC AAGAAGCTGA AGAGGCCAAG GAGGCCTTGC TGCAGGCCTC CCGGGACCAG 000160 000161 AAAAAGACTC AGGAACAGCT GGCCTTGGAA ATGGCAGAGC TGACAGCTCG AATCTCCCAG CTGGAGATGG CCCGACAGAA 000240 000241 GAAGGAGAGT GAGGCTGTGG AGTGGCAGCA GAAGGCCCAG ATGGTACAGG AAGACTTGGA GAAGACCCGT GCTGAGCTGA 000320 000321 AGACTGCCAT GAGTACACCT CATGTGGCAG AGCCTGCTGA GAATGAGCAG GATGAGCAGG ATGAGAATGG GGCAGAGGCT 000400 000401 AGTGCTGACC TACGGGCTGA TGCTATGGCC AAGGACCGCA GTGAGGAGGA ACGTACCACT GAGGCAGAGA AGAATGAGCG 000480 000481 TGTGCAGAAG CACCTGAAGG CCCTCACTTC GGAGCTGGCC AATGCCAGAG ATGAGTCCAA GAAGACTGCC AATGACATGA 000560 000561 TCCATGCTGA GAACATGCGA CTGGGCCGAG ACAAATACAA GACCCTGCGC CAGATCCGGC AGGGCAACAC CAAGCAGCGC 000640 000641 ATTGACGAAT TTGAGTCTAT GTAATGGGCA CCCAGCCTCT AGGGACCCCT CCTCCCTTTT TCCTTGTCCC CACACTCCTA 000720 000721 CACCTAACTC ACCTAACTCA TACTGTGCTG GAGCCACCTC CTTCTCTGTC TCATGTGTGC TCTTCTTCTT TCTACAGTAT 000800 000801 TATGTACTCT ACTGATATCT AAATATTGAT TTCTGCCTTC CTTGCTAATG CACCATTAGA AGATATTAGT CTTGGGGCAG 000880 000881 GATGATTTTG GCCTCATTAC TTTACCACCC CCACACC |
Predicted Small Protein
Name | NONHSAT137347_smProtein_563:814 |
Length | 84 |
Molecular weight | 9055.1271 |
Aromaticity | 0.120481927711 |
Instability index | 41.156626506 |
Isoelectric point | 8.29107666016 |
Runs | 7 |
Runs residual | 0.0556894243641 |
Runs probability | 0.048123754006 |
Amino acid sequence | MLRTCDWAETNTRPCARSGRATPSSALTNLSLCNGHPASRDPSSLFPCPHTPTPNSPNSY CAGATSFSVSCVLFFFLQYYVLY |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLEEEEEEEEELEEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiTTTTTTTTTTTTTTTTTTo |