NONHSAT137397
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137397 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1343 nt |
Genomic location |
chrX-:69344822..69348921 |
Exon number |
5 |
Exons |
69344822..69344904,69345196..69345337,69345904..69346654,69346978..69347212,69348790..69348921 |
Genome context |
|
Sequence |
000001 GCCACATGGC ACTTTTTACT GTAGCCATCC TCATCCAAAT ACCCTGAAGT TTTATGGGTG CAGTTGTCCT AATAATTGCC 000080
000081 CATGGACTCA CATCATCTAT ACTGTTTTGC CTTGCAAACT CAAATTATGA ACAATATTTA CAAAAGTAAC TCCTACCTCA 000160 000161 CCTACATAAA AACCTCCATC ACATGAGCAC TTCATTACCA GTCTCATTCC AACTACTACA TTTATTTACC CACTTCAGGA 000240 000241 AACCATCATC TCAAAATGAC ACTGAAAGAC CACCCAAACC CTAAAACTCT CACTTAGCTT TAAACTAGAT TATTTTTCAA 000320 000321 TAGTATTTAT ACCGGTAGCA CTCTTCATCA CATGGTTGGT TATAGAAATA TATACACTCA GGCCCTAATA TCAATCATTC 000400 000401 TTCAAATATT TACTCACATT TCTCATCACC ATACTAATTC TAGTCACTAC CAACTTTTCA TTGGATGAGA GGGAGCAGGT 000480 000481 ATCGTATCTT TACTACTAAT CAGCTGATGA TGTGGCTGAA CAGATGCTAA CACAGCAGCC CTATAAGCAA TTCTACATAA 000560 000561 TCGCATTGGA GACATTGGCT TCATCTTAGC AATAGCATGG TTCCTATCAT TCTCTAATAC ATGAGAATTT CAACAGATAT 000640 000641 TTATTCTTAA CCCCAACCCC AATATCCTCC TACTAATTGG GCTCCTAGTA GCAGCAACTG GCAAATCAGT TCCATTTGGA 000720 000721 CTTCATCCAT GACTTCCATC AGCCATGGAA GGCCCAACTT CCATCTCTGC CCTCCTTCAT TCTAGCATAA TAGTAGTAGC 000800 000801 AGGTATCTGC CTACTAATTT GCTTTTACCC CTTAATACAA AATAATATAA TCATTCAGGC ACTTACACTA TGCTTAGGTG 000880 000881 CCATCACCAC TTTATTCACA GCGATCTGAG CTCTAACACA AAATGATATC AAAAAAATTG TAGCATTTTC TACCTCGAGT 000960 000961 CAACTAGGTC TCAGTAGTTA CAACTGGCAT TAATCAACTT CACCTAGCAT TTCTTCATAT CTATACTCAC ACTTTCTTAA 001040 001041 AGCCATAGTG TATATGCTCT GGATCTATTA TTCATAATCT AAATAATGAA CAAGACATCT TCACTTCCTC CTCACTTAGC 001120 001121 AATTGGTAGT ATTTTTGCTG GATTTTTCAT CTCCAGCAAT ATTACTCCTA TACCTATTCC CCAAATAACT ATGCCCCTCT 001200 001201 TCCTAAAACT TACAGCCCTT GGCATAACTA TTCTAGGATT TTCAGTAGCA ATAGAACTTA AAAAGCAACA CCAAAAAATA 001280 001281 TAGCCCAGCT CTAAAAACTA GCCTCGATCA CTGTATCCAG CCAAAAAGGC CTAACCAAAC TCT |
Predicted Small Protein
Name | NONHSAT137397_smProtein_1085:1282 |
Length | 66 |
Molecular weight | 7045.4399 |
Aromaticity | 0.0769230769231 |
Instability index | 47.7676923077 |
Isoelectric point | 10.1763305664 |
Runs | 11 |
Runs residual | 0.0189423076923 |
Runs probability | 0.048826901768 |
Amino acid sequence | MNKTSSLPPHLAIGSIFAGFFISSNITPIPIPQITMPLFLKLTALGITILGFSVAIELKK QHQKI |
Secondary structure | LLLLLLLLLLHHHHHHHLLEEELLLLLLLLLLLLLHHHHHHHHHLLLHHHLLHHHHHHHH HHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL LLLLL |
PiMo | ooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiii iiiii |