NONHSAT137874
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137874 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1018 nt |
Genomic location |
chrX+:97643311..97645587 |
Exon number |
2 |
Exons |
97643311..97644294,97645549..97645587 |
Genome context |
|
Sequence |
000001 TAACTCTTGA CAAGGTTACC AATGATTTCC ATGTTCCTAA ATCCCACACT CAATTCTCAG TCCTCATATT ATTTTCCTAT 000080
000081 AAGCTGCATT TGACATAATT TGATCATTTA CTCCTTGGCT TCTGTCTCCT TCCCTTTTGG CTGCTTTTTC TTGGCATACT 000160 000161 TTGCTTGATC ATCCTTATCA TCCAGATATC TTGAGTGTTG GAACCCCCGG TGGCTTAGTT CTAGAATTTT TTCCTTATAT 000240 000241 TTTCTTATTG CAAGGCATGT GACTTTCTGC TTGAGGACTT TCTCTGGCCA CAGGAGTGTG CTCTACCTGT AACTCGGGTG 000320 000321 GGCTGCCACT GAAATTTAGT ACTGTTAGAT CAGCCCTTAA TCAATAATTG ACAGAAATTA GTGGATAAAT ATCCCGACTT 000400 000401 CTTTACTGCT TCAGAGAGAT GACATTAGGA CATGTTCTAT AGTTTCTTGG AATTCTCCTT CAGCTGGATC GAGCTTCAGT 000480 000481 TGCACACAGA AGTAAACTTT TTGTTTATTA ATGCATGCTG TATTGGCTTT CTTCCCTTTT CTGTCTCACT TCTCTATTTT 000560 000561 CCAATTGGTG CTTCCTGGGG TCACCTCTTG TTTAAACTTG GGCATTTAAA CTTGGATATT AAACAGATTC TGAGACAGAG 000640 000641 ATGTGTGTGC AAGAGGTTTA TTGAGGAGTG ATCTCAGGAA TGACATTAGT AAAGTTGTGA GAGAAGCAGG ATTGGTCACA 000720 000721 GGGAGAAGCC GAACTACAAT GCAAAAGAAC CATTGGTATT AGCTGACTCT GTGGGGAGCT TTATAACTAG GATGTCCTTC 000800 000801 AGAGTTAAGG CAAAAGGGTC AGGGGCTTGT ATCTTGCATA GACCAGTCAT TGTATGCAAC TTGTCCCTGG GAAGGGGCTA 000880 000881 TAACCTAGAC AAGATAGCTC TTATTGGCTA AGGGCAATGT TCAGAGAAGG ACTCATGAGC CATCAGCAGC AATACTCCTG 000960 000961 AAACTGGGAA AATGAGCAAT GGCTTCACTG CTCAGGTGAT TATCCTGAAC CATCCAGG |
Predicted Small Protein
Name | NONHSAT137874_smProtein_431:670 |
Length | 80 |
Molecular weight | 9380.0097 |
Aromaticity | 0.189873417722 |
Instability index | 52.8735443038 |
Isoelectric point | 6.80828857422 |
Runs | 9 |
Runs residual | 0.0263568579851 |
Runs probability | 0.0398830202752 |
Amino acid sequence | MFYSFLEFSFSWIELQLHTEVNFLFINACCIGFLPFSVSLLYFPIGASWGHLLFKLGHLN LDIKQILRQRCVCKRFIEE |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLEEEEEELLLLLHHHHHHHHLLLL LLHHHHHHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiii iiiiiiiiiiiiiiiiiii |