NONHSAT138131
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138131 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2227 nt |
Genomic location |
chrX+:107461382..107463608 |
Exon number |
1 |
Exons |
107461382..107463608 |
Genome context |
|
Sequence |
000001 ATTAAAACAA GACTGCAGGA GGAAGGGCAT ACTAAGACGG AAAGCTCCAA GTCCTCCACT CATCTCTGGC AAAGCCAGGT 000080
000081 CCACAGGATG AATGGAAGAG GCTGCCTCCA GTTTGCTAGT TTCCCTTACC CAGTGGCTCC CAGAAGATAC ACAGTCTGGG 000160 000161 TGGAGACTCT GGCTAAAGGG GCATAGGAAC ACAGCCATAA GAAAATGTCA GGAGACATCA CAAAAGGATG GCCAACCCTG 000240 000241 TCCGCTTATT TTCCCACTGG TCTATTTCTG GGCATTTTTG CAGACTCTGC AGTTGAATAA AATGCTGAAG TCTGATGGCC 000320 000321 GATTTGTTGA TACATGCAAC AGATACGAGG TAAGTGAGCC TTCAGTTCTT CAAATTCATA AATTTCTACT ACATCAGAGG 000400 000401 AGACAATGAA TCAGATGATA CTATCTTTCA GGGCAGAGCC ACATGATTCC TCTGTATACC CAAGGTTGAG TGCTAACATA 000480 000481 CAGCAGGGGC ACGTTAAATA TCTATAGATT GGCAAAAAGA GATTTGAACC CCTTTTCCTG ACATTAGATT ATTATTGAGT 000560 000561 ATAACACAAA AGCTGTTAAT TATAGGGCCT CCAAAAACCA TGCTTTGATA AGGTTCAGAA CAATCTCTGA GAGGCTGTTG 000640 000641 GAAGGATAAA AGCAGGCTCT AGGACCTCCC ACAAATGGAG GAGCTGCACT GTTTTTTTCT GTTCTATATG CTGAGATTCT 000720 000721 GTTCTTCTAT TAAACAAGAT TGAAAACTGC TGCTGTAGAC AAACATAGCC CAGACTATGG CTTAAATATA TAGAGAAGTG 000800 000801 TCAAAGGGAA AAACTAAAAA AAGATAGCCA GTAAGTTCCA AATATTGTAT TTTAAAGGCT GGTGCAATGC TACCATGGAA 000880 000881 TCACCAGTGG TGGGATAGGC ACAGATACAG GATGAAAATA GAGAAACTAA GGGATTAGGC TGGGTGGATG GAAAAAAGAA 000960 000961 ATGTCTGCAA GTTCCAAACC TTCCACTTCT CTTGGGCAGA GCAGAGGTCC ACAGGACAAA TTTTGCAAGA GGCTGCCTCC 001040 001041 AAGTGATCTT TGGAGTAGTC ACTTTGTAAA AACTTTAAAG GAAAATTCAC TCTGAAATGA GGTATGTCTG AAGAGAACAA 001120 001121 ATTACAAAAT GGAATGTATC AAGATATCAT GAAGGATTTT ACCCTCTAAT TTCATGTACC ATCTTAATTT CCCTATATGA 001200 001201 GGATATATAT CCTCTAATGT GGCTCTGTCT TTACACCTTA GAACCAGTTC CTCATCTCCA ATCAAAGCTC CACTCAACCC 001280 001281 ACAAGACTTA ACTCATGTTG GCTAAGATAT TGATGTTATG GCTACACAGG TCCCTCCGCT CTCCAATCAT CCGACATAGG 001360 001361 GCTGCTTGTG CCTGAATCCA AGGGCAATTG TGTGTGACCA CTGCCCTTTA AACCTCACCA TACATATCTC AACACTTGTT 001440 001441 CCTGAGCATG CTTGCATGAG ACAGGATGTT GCTGAGGTCA AAGTGTCCAA AATATGAGGC AGAACCTAAA GGAGGATATG 001520 001521 AAAAATTCAT CTGTGGACAC ACTCACCGGA ATCCCATTGA TGCCAAGAAA GCCAGGAACT CCCATGGGAC CCTAAAAAAA 001600 001601 GGAGTAGGGA GAGGAATGTA AGACACAATC CAACTGATGT TTGTTAGACT CAGTAGGTTT ATGAGAGTCA ATGGCCTACA 001680 001681 TTTTTAAGAA GTGTTTCGTA CCCCCCTCCC CATATTGTAT TCCCTTGATT CCTACTGCAG TTCGAAGTGA CCATTTACCT 001760 001761 CTACCTAAGG CCTTAGACAG GTCTTTGTTC CGAAACCAGC TCTTTTTTTT AAGGGAGTAT AGTCGAGGTT TTAAAATTAA 001840 001841 GGCTTACTAT TACCTGCTGC CATCTGGGGA AAACTGGAGA ACCTTGAATG TCCTAATCAC AAGTTTCCCT CTCCATTATG 001920 001921 CTTCTACAGA TAAGGTCCCC TAGCCGAACA ACTCTCCTTA TCAAATGGAC CAGGTGCAAT TCCTGCTTAT CCTGGAATAG 002000 002001 CAGTTTCAAT TTCTTGCTGG CCTACTGGAC TATTCAAACA AGCCAATTGC ATCCACCTTC AGGAACCAGG GGCACCCTGC 002080 002081 CCTACTGATA CTACAAAGTC TGCTTTGCAC AGCCTTTTCT TCTAAACTCT GTTCCCAAGT GCTATCCCTA TGTGGCCCTA 002160 002161 TGTGGTGTGT GGTATCTTCC TCCCCTGAGC TGTGAGTATA TGTGACTAAT AAATTGCTGT CAACTTC |
Predicted Small Protein
Name | NONHSAT138131_smProtein_1670:1942 |
Length | 91 |
Molecular weight | 10543.2938 |
Aromaticity | 0.166666666667 |
Instability index | 48.7111111111 |
Isoelectric point | 9.69525146484 |
Runs | 11 |
Runs residual | 0.0176366843034 |
Runs probability | 0.0301183536478 |
Amino acid sequence | MAYIFKKCFVPPSPYCIPLIPTAVRSDHLPLPKALDRSLFRNQLFFLREYSRGFKIKAYY YLLPSGENWRTLNVLITSFPLHYASTDKVP |
Secondary structure | LLHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLEEEEEE EELLLLLLEEEEHHHEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |