NONHSAT138530
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138530 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1006 nt |
Genomic location |
chrX-:130475421..130476426 |
Exon number |
1 |
Exons |
130475421..130476426 |
Genome context |
|
Sequence |
000001 ATGTGTCTCA CCATTGTGAT GCATTGTGAA TTCTTCCTCA TGGACTTGAC TGATGATCCT CAGCTTCATC CCACCTTCTC 000080
000081 TGCCCTCTTC CTCCCCATCT ATGTAGTCAT GGTGATGGAA ACCTGGGCCT CCTTGCCTTC ATTGTGGTCA GTCCCCAATT 000160 000161 CCTCACCCCC ATGTATTTCT TCCTCAGCAA CTGGTCCTCT GTTGACTTCT GTTATTCTTC AGTAACAGTC CCAAAAATAT 000240 000241 CAATGGGGTT CTTTTCTGAC TGCCAAGTCT TCTCCTTCTC TGGTTGCATG GCCCAGTTAA GCTGCTTTTA AAATATTTGC 000320 000321 TGACACCGAG TTCTTCCTCC TGGCCTCCAT GGTCTATTAC CGCTAAGAGG CCGTCTGCAA TCCTCTGCTC TACCATATCA 000400 000401 CCATGTCCCC AAAGCTCTGC TTGCAGCTGG TGGCCACCAG CTATGAACAT GGTGCTCCCT AGTAGCACAA TCTTTCATCT 000480 000481 GATCTTCTGT AAGTCTGTGC CATCATTCAT TAATTCTGTT ATTTCCTCCC CCACCGAGGC TTTAAAAACT CTCCTGCTCT 000560 000561 GACATGCAAG GCCTTCAACT TCTTACCTTT GCCTCTAGTA GCTTTAATGT ATCGGTGTCC CGGACAATCT TCCTTGTCTC 000640 000641 CATTTAATTA TGAGAATGCC CTCGGTTTGA GGCAAACACT TGTGCTTCCC ACCTGACAGC AGTCAGCCTG TGCTATGGAA 000720 000721 CCACAGTGTT CCTTCACCTG CACCTATCCT TGAAGTGTTC ACCAGACAGA GATATGCTGG TCTCTGTTTT ACACAGTGGC 000800 000801 TATTCTCATG CTCAACCCCA TGGTCCAAAG TCTGAGGAAC AAGGATGTGA AGAAAACATT TGGGACTTCC TCATGAAGGT 000880 000881 TTACAATTCC TCTCCTTCCC CACGCCCAGG TCCCCACGCT GTCCAAAATA GTAAAGGAGG GTAAGGGAAG GGAAAGAGAT 000960 000961 GGAAGTGATA TATTTTGGTA GCCAAAtgtg tctcagacat tattct |
Predicted Small Protein
Name | NONHSAT138530_smProtein_773:943 |
Length | 57 |
Molecular weight | 6103.7065 |
Aromaticity | 0.0714285714286 |
Instability index | 57.4035714286 |
Isoelectric point | 6.37762451172 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0395563630858 |
Amino acid sequence | MLVSVLHSGYSHAQPHGPKSEEQGCEENIWDFLMKVYNSSPSPRPGPHAVQNSKGG |
Secondary structure | LEEEEEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLEELLLLL |
PRMN | - |
PiMo | - |