NONHSAT138545
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138545 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
510 nt |
Genomic location |
chrX-:130890639..130919294 |
Exon number |
4 |
Exons |
130890639..130890740,130902579..130902724,130917915..130918066,130919185..130919294 |
Genome context |
|
Sequence |
000001 TGAGACAGGC CCTCCCTCCG TTGCCCAGGT GGGAGTGCAG TGGTGTGATG TCAGTTCACT GCAACCTTGG CCTCCCGGAT 000080
000081 TCAAGCGATT CTCCTGCCTT AACCTTCCGA CATGGATCCC TGAGGTCGGT CCCCAATACG ACAAGACAAT TTGATATCAT 000160 000161 AATAGAACAC TGCAGAAACA ATGCTGAGTG AAGAAGAGTA GAAATGGGAA GACTTGGTTG AGCGGAAACT GAGTTCTTGA 000240 000241 AAAGAGGAGA TGCTTGATGA GGGCATGGAT CCCTGAGGTC TGCCCCAGTA CTATAAGACA ATTTGATGTA AGAAAACACA 000320 000321 GCAGATATAA TACTGAGTGA AGAAGAGTAT AAATGAGAAG ATTGGTTGTG CAGATACTGA GTTCATGAAA AGAGGAGATG 000400 000401 ATTGATGATA GCCAGGTGCG GTGACTCATG CCTGTAATCC CTGCACTTTG GGAGGCTGCG GCGGGCGGAT CACCTGAGGT 000480 000481 CAGGAGTTCG AGACCAGCCT GGGAGACAGA |
Predicted Small Protein
Name | NONHSAT138545_smProtein_47:190 |
Length | 48 |
Molecular weight | 5237.7799 |
Aromaticity | 0.0425531914894 |
Instability index | 83.114893617 |
Isoelectric point | 6.23748779297 |
Runs | 9 |
Runs residual | 0.0252127659574 |
Runs probability | 0.0295589707355 |
Amino acid sequence | MSVHCNLGLPDSSDSPALTFRHGSLRSVPNTTRQFDIIIEHCRNNAE |
Secondary structure | LEEEELLLLLLLLLLLLLEEELLLLLLLLLLLHHHHEEEEHHHLLLL |
PRMN | - |
PiMo | - |