NONHSAT138606
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138606 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
724 nt |
Genomic location |
chrX+:133511669..133521619 |
Exon number |
3 |
Exons |
133511669..133511736,133520076..133520193,133521082..133521619 |
Genome context |
|
Sequence |
000001 AAAAAAGGGC CTACAAGACA GCGCAAATGT GGCTTTTGTA AGTCAAATAG AGACAAGGAA TGTGGACAGA AGGCTCCATA 000080
000081 GAAAACGAGA GTTGAAATGT GTTCCACCAG GAGAGTGATG CTATGGAAGT CAAAGACAAA CAATTTCAAG GAGGAAGAAG 000160 000161 TGGTCAAAAA ATATTAAATA AGTATTGTGA ATGTATTCAT ATAAATGTGA TTTTTTTTAA AAGCTCCAGT TATGGCATGC 000240 000241 AGATTAATTT TAATGTATGC AGATATTTTA CCAGTCATTT ATATTAAAAT GAACTTTACT TTTGAGGTGA TAAAGGAGAA 000320 000321 TGAATGTAAG GTCAAAGAGA AACTTGGAAG TGTAATGATG GAGGAAATTG GGTCTTTGGC TATTACTGAA TACATTTTTT 000400 000401 TAATGCATAA TTTTTTTATT TGCCTCCATT TAATACTTTT TGGTAACTGG GAATACTGTC AATTAATTTC ATTATAAAAT 000480 000481 CCTCATTTAT TTTTGCTAAT GGAGGAGATC CAAAACCAAT AATATAAACA AAATGTATTC TTGGTGTTGG GGGCTGTCTT 000560 000561 GGTACTTATT TGAGCATAGG TGTGGATGAG GTGTTCTTCA CAGACTAAAT ATAGCAAGCG GCATAGCAGT TTAGAGTACC 000640 000641 CTCAGCTGGA AAAACCCATA CACGAGAAAA GCTTGGACAT AAAAATCTGA GCTCAGAAAA TGTCTGTCTG AATCTTTCAG 000720 000721 ATAC |
Predicted Small Protein
Name | NONHSAT138606_smProtein_122:286 |
Length | 55 |
Molecular weight | 6402.3437 |
Aromaticity | 0.166666666667 |
Instability index | 43.2537037037 |
Isoelectric point | 9.18377685547 |
Runs | 10 |
Runs residual | 0.0224932249322 |
Runs probability | 0.0445680975093 |
Amino acid sequence | MEVKDKQFQGGRSGQKILNKYCECIHINVIFFKSSSYGMQINFNVCRYFTSHLY |
Secondary structure | LEELLLLLLLLLLHHHHHHHHLLEEEEEEEEEEELLLLEEEEEEEEHHHHHLLL |
PRMN | - |
PiMo | - |