NONHSAT138744
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138744 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
976 nt |
Genomic location |
chrX+:136004249..136075823 |
Exon number |
3 |
Exons |
136004249..136004935,136007406..136007511,136075641..136075823 |
Genome context |
|
Sequence |
000001 CAGCACCCCG TGTCTAGCTC AGGGTTTGTG AATGCACCAA TCGACACTCC GTATCTAGCT AATCTAGTGG GGACGTGGAG 000080
000081 AACTTTTGAG TCTACCTCAG GGATTATAGA TGCACCAATC AACACCCTGT CAAAACGGAC CAATCAGCGC TCTGTAAAAC 000160 000161 AGACCAATCA GCTCTCAGTA AAATGGACCA ATCAGCAGGA TGTGGGTGGG GCCAGATAAG GGAATAAAAG CAGGCTGCCG 000240 000241 GACCCAGCAG TGGCAAGGCG CTTCGGTTGT CTTCCATGAT GTGGACGCTT TGTTCTTTTG CTCTTTGCAA TAAATCTTCC 000320 000321 TGTTGCTTTC TTTGGGTCCA CACTGCCTTT ATGAGCTGTA ACACTCACCG TGAAGGTCTG AAGCTTTACT CTGGAAGCCA 000400 000401 GTGAGACCAG GAACCCACCG GGAGGAATGA ACGACTCCAG ACACACCGCC TTAAGATCTG TGACACTCAC CGCGAAGGTC 000480 000481 TGCAGCTTCA TTCCTGATCC AGCGAGACCA TGAACCCACC AGAAGGAAAA AACTCCGGAC ACATCCGAAC GTCTAGAAGA 000560 000561 AACAAACTCC AGACACACCG CCTGTAAGAA CTGTAACGGT CACCGCGAGG GTCCGCGGTT TCATTCTTGA AGTCAGTGAG 000640 000641 ACCAAGAACC CACCATTTCT GGACACACTA CCATGCCAGA GATCCAGGGG CTGCAGCATG CTGAAAGAAA ACAGAAGCCT 000720 000721 GTGGAGTGAG CCAAGATCAA CCAGGAAATA AACCCTTTCC CTTGCGATGT CTCTCCAGCG CCCTCTACTG ACATCAGAAT 000800 000801 TGTCTTTGCT GATCTCTTTA TTATGATGAA AATTCTCTGG ATGGAAGGGT CATCAGCTGC CGTCTCCTTT GCTACTCTGC 000880 000881 TAGATATCCT TACAATTTGG TTTAGAATTT TAGTACCACT AACATTTTTT GGTGCATATT TTGGAAATAA AGAAAAGGTA 000960 000961 AACTCTTAAA ATACTG |
Predicted Small Protein
Name | NONHSAT138744_smProtein_275:403 |
Length | 43 |
Molecular weight | 4823.6424 |
Aromaticity | 0.142857142857 |
Instability index | 42.05 |
Isoelectric point | 8.38494873047 |
Runs | 8 |
Runs residual | 0.0143158529234 |
Runs probability | 0.049372902314 |
Amino acid sequence | MMWTLCSFALCNKSSCCFLWVHTAFMSCNTHREGLKLYSGSQ |
Secondary structure | LHHHHHHHHHLLLLLLEEEEHHHHHHLLLLHHHHLLLLLLLL |
PRMN | - |
PiMo | - |