NONHSAT138981
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138981 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1599 nt |
Genomic location |
chrX+:149115589..149121272 |
Exon number |
3 |
Exons |
149115589..149116393,149116524..149116612,149120568..149121272 |
Genome context |
|
Sequence |
000001 TTACTTGTAA GGGGGCATCT TACAGGCAAG AGGAGTTAGG TGAATGTGAA GAGGAAGGAA CTACTCTGGG CAGGGGGCTG 000080
000081 GGGGACGCTT CGTAGAGGAG GGGGTGTTTG AGCTGGGCCT TGAAGGTCAA AAGGGTTTTG TTAGGTGGGA AATGGGGGAA 000160 000161 GGACAGTCTG AAAGGGTTAG GTACATTCAA GGAGCCCAGA GAAGGTTCGT GGCTGGAGCA GACGCATTCG TAGAGTGAAG 000240 000241 TCATGGGAGA GAAGAGGCTG GGAAACTAGA TTGGTTCCAA CTCCTAAAGG ACCACTGAAG GAGTGTGGGC TGCACGCTGG 000320 000321 GTGCAGCAGG TGAGTTTCCT CACTTGGGTT TCACTGTCAG CATTTTAAAA AGGCAAACTG GTTTTCTTCC TGAGAAGAAT 000400 000401 TCATTGATTC ACTTGTGGCC AGTAAGTCAT CTGGGCCAGA GGTTGGTGGG GAGATGATAG GGGTGCAAGT GTCATCTTCA 000480 000481 ATCACAGCAT AACTGCCCTT GCTTTCTTAC CTCTCGTTTA GATATTTCAA TGCTTGCTCA GGTCCCCTGC GCCCTCCTTC 000560 000561 CTTCTCCCTT CCCAGCCATA CTACTTATGG GATGACTTTC TCTTTGTAAA ATGACCGTTA GTCTTATCAA ATTAATCCCA 000640 000641 AAGTAATACC ATCAATTTCC CCCTAAAATA CCAACAAGAC CCCTGCTTGA AACTGCTTGT ACATTAGAGA CAGAGAAGAG 000720 000721 TCCATGAGAA TCAACATTTT CTGAGGACTC CAACTGTGTG CCAAGAGAGT TCCCCTGCTG GTGCCTCCTC TGTAGTAAAG 000800 000801 GAAAGGCTCC TGGGACCACA TTATCATTCT CTTCACTCGA GAGATGAGGA CACTGAAATT CAGAGAGGGG AAGTGATTTG 000880 000881 CCTCAGCTTG TACTGGTTTC ACTTTGTCAC TCAGGCTGGA GTGCAGTGAT GTGATCATAG CTTTCTGCAG CCTTGACTTC 000960 000961 CGGGCTCAAG TGATCCTCCC ACCTCCGCCT CCTTAGTAGC TAGGACCACA GGCATGCACC AGCACACCCA GCAAATTAAA 001040 001041 AAAAAATTTT TTTTAAAGAT GAGATCTCAC TATGTTGCCC AGGCTGGTCT GAAATTCCTG TCCTCAAGCA ATCCTCCTGC 001120 001121 CTTAGCCTCC CAAAGTGCTG AGATTACAGG CATGAGCTAC CATGCCTGGC CTAAAACATT TTTAATGGAA GTATAATTTG 001200 001201 CAAACAGAAA ACATGCCCAA ATATTAAGTG AATGCACTGA TGAACATTCA CAACTTAACA AGATAGCCAG CACTTAAATC 001280 001281 ACAAAATAGA ACACCGCTAG GACCTCTTTG TAATACCCTC CAAGTCACTA CTTCTGCCCA AAGGTAATCG CTATTTTGCA 001360 001361 ACATTTTTTA TTACTTTATA TAAATGAGAT CGTACACTGC GTAATCTTAT TACTGTCTGG ATTTTTATAT TAAATATTGC 001440 001441 TTGTGAGATT CATCCATGTT GTCATGTCAG CAATACTTTA TTCTCATTGC CATATACTAT TCCATTTTTA TCAGTATACC 001520 001521 ATGATATATT TACCCATTCT GCTATTTGTA CATACTGGAA TTGTTCCCAG GTTTTTGTAA TACAAGCAAA GCTGCTATG |
Predicted Small Protein
Name | NONHSAT138981_smProtein_1013:1195 |
Length | 61 |
Molecular weight | 6865.9377 |
Aromaticity | 0.116666666667 |
Instability index | 70.78 |
Isoelectric point | 9.99810791016 |
Runs | 11 |
Runs residual | 0.0335992907801 |
Runs probability | 0.0347754171285 |
Amino acid sequence | MHQHTQQIKKKFFLKMRSHYVAQAGLKFLSSSNPPALASQSAEITGMSYHAWPKTFLMEV |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHLHHHHHLLLEEELLLLEEEEEL |
PRMN | - |
PiMo | - |