NONHSAT139213
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139213 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
989 nt |
Genomic location |
chrX-:154006998..154009871 |
Exon number |
2 |
Exons |
154006998..154007628,154009514..154009871 |
Genome context |
|
Sequence |
000001 GGTAGGCATG GAAGGGCAGG GACAGATGGG CTCAGCCACA CAAGGGATGG CGAAGACAGT GCTCCTTGGG AATCTTCTGG 000080
000081 GGGCTCAGGA TTGCTTCAGC CTTTTAATGG GGTCAGCCTG GAACAAGAAC AGTAGTACTG GGAATGATGG AAAGTTGTAT 000160 000161 TGGGGTAAAG CTCAAAGCTG CTTATTAGAA GGAATCCATT ATGACAGCTA TGTAGGTTTT TTTTTTTCAC TTTCCTTTTC 000240 000241 TTCCTTCCCC CCCCTCCCCG CCGCCCTTCT TTTTTTTTTC TAGACCCTGA AAATTGTTCG GACAGCAGAA CTTTCGCCTT 000320 000321 TCATTGTGTT CATTGCACCT ACTGACCAGG GCACTCAGAC AGAAGCCCTG CAGCAGCTGC AGAAGGACTC TGAGGCCATC 000400 000401 CGCAGCCAGT ACGCTCACTA CTTTGACCTC TCACTGGTCA ATAATGGTGT TGATGAAACC CTTAAGAAAT TACAAGAAGC 000480 000481 CTTCGACCAA GCGTGCAGTT CTCCACAGTG GGTGCCTGTC TCCTGGGTTT ACTAAGCTTG TAGAATGGGG GAACCCACTG 000560 000561 TATGCCCCTC TCCAGCATTT GGAATTCCAC CCGCCTTGCT TTAAGACAAA CAGGGCTGCT CCAACTAGTT TTGTGTCAGC 000640 000641 TTCCAGCTCT CTGCAGCTAT CCTAATTCAG CCAGTAAGGT TCAGTCTTCT TGCTCAGGCT CCTGAAGGGT TGATTCTCCT 000720 000721 GATAGATGGG GCCCCACTGA TCTGGATTTG AAAAGGATTT CTAGAAATTG GGGGTAAGAA GTACTACCAA AATGTAACTG 000800 000801 CTAATCAAGG GTGATGCACA GCAAAAGCAA TGGACCCCAT CCCTCTAAAG CCTGCCCTCC TTTGCCTTCA ACTGTATATG 000880 000881 CTGGGTATTT CATTTGTCTT TTTATTTTGG AGAAAGCGTT TTTAACTGCA ACTTTCTATA ATGCCAAAAT GACACATCTG 000960 000961 TGCAATAGAA TGATGTCTGC TCTAGGGAA |
Predicted Small Protein
Name | NONHSAT139213_smProtein_443:664 |
Length | 74 |
Molecular weight | 8113.4239 |
Aromaticity | 0.0958904109589 |
Instability index | 41.5095890411 |
Isoelectric point | 10.030456543 |
Runs | 13 |
Runs residual | 0.0339372514361 |
Runs probability | 0.0479121655592 |
Amino acid sequence | MVLMKPLRNYKKPSTKRAVLHSGCLSPGFTKLVEWGNPLYAPLQHLEFHPPCFKTNRAAP TSFVSASSSLQLS |
Secondary structure | LEELLLLLLLLLLLLLEEEELLLLLLLLLEEEEELLLLLLLLLHHHHLLLLLLLLLLLLL LEEEELLLLEELL |
PRMN | - |
PiMo | - |