NONHSAT139255
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139255 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1769 nt |
Genomic location |
chrX+:155251353..155255331 |
Exon number |
8 |
Exons |
155251353..155251457,155251664..155251810,155251988..155252499,155252677..155252874,155252967..155253125,155253785..155253937,155254697..155254765,155254906..155255331 |
Genome context |
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Sequence |
000001 CAGCAGGTAG AGCAGAGCCG GAGCCAGGTG CAGGCCATTG GAGAGAAGGT CTCCTTGGCC CAGGCCAAGA TTGAGAAGAT 000080
000081 CAAGGGCAGC AAGAAGGCCA TCAAGGTGTT CTCCAGTGCC AAGTACCCTG CTCCAGAGCG CCTGCAGGAA TATGGCTCCA 000160 000161 TCTTCACGGG CGCCCAGGAC CCTGGCCTGC AGAGACGCCC CCGCCACAGG ATCCAGAGCA AGCACCGCCC CCTGGACGAG 000240 000241 CGGGCCCTGC AGGAGAAGCT GAAGGACTTT CCTGTGTGCG TGAGCACCAA GCCGGAGCCC GAGGACGATG CAGAAGAGGG 000320 000321 ACTTGGGGGT CTTCCCAGCA ACATCAGCTC TGTCAGCTCC TTGCTGCTTT TCAACACCAC CGAGAACCTG TATGGCCAGA 000400 000401 AGGCAGGGCC GAGGGGTGTG GGCGGGAGGC CCGGCCTGGC TTAGTGGGGA CCCAGGGCAT CAGACACAGG TACAGCACAT 000480 000481 AGGCCAGGAG CCAGGGGGTG ACTGGGGTGG CTCGGCTCGG GAGGCCTGGG ACCCCACAGT GCACGCTGTG CCCCTGATGA 000560 000561 TGTGGGAGAG GAACATGGGC TCAGGACAGC GGGTGTCAGC TTGCCTGACC CCCATGTCGC CTCCGTAGGT ACAAGAAGTA 000640 000641 TGTCTTCCTG GACCCCCTGG CTGGTGCTGT AACAAAGACC CATGTGATGC TGGGGGCAGA GACAGAGGAG AAGCTGTTTG 000720 000721 ATGCCCCCTT GTCCATCAGC AAGAGAGAGC AGCTGGAACA GCAGGTCCCA GAGAACTACT TCTATGTGCC AGACCTGGGC 000800 000801 CAGGTGCCTG AGATTGATGT TCCATCCTAC CTGCCTGACC TGCCCAGCAT TGCCAACGAC CTCATGTACA GTGCCGACCT 000880 000881 GGGCCCCGGC ATTGCCCCCT CTGCCCCTGG CACCATTCCG GAACTGCCCA CCTTCCACAC TGAGGTAGCC GAGCCTCTCA 000960 000961 AGACCTACAA GATGGGGTac taacaccacc cccaccgccc ccaccaccac ccccaGCTCC TGAGGTGCTG GCCAGTGCAC 001040 001041 CCCCACTCCC ACCCTCAACC GCGGCCCCTG TAGGCCAAGG CGCCAGGCAG GACGACGGCA GCAGCAGCGC GTCTCCTTCA 001120 001121 GTCCAGGGAG CTCCCAGGGA AGTGGTCGAC CCCTCCGGTG GCTGGGCCAC TCTGCTAGAG TCCATCCGCC AAGCTGGGGG 001200 001201 CATCGGCAAG GCCAAGCTGC GCAGCATgaa ggagcgaaag ctggagaaga agaagcagaa ggagcaggag caagTGAGAG 001280 001281 CCACGAGCCA AGGTGGGCAC TTGATGTCGG ATCTCTTCAA CAAGCTGGTC ATGAGGCGCA AGGGCATCTC TGGGAAAGGA 001360 001361 CCTGGGGCTG GTGAGGGGCC CGGAGGAGCC TTTGCCCGCG TGTCAGACTC CATCCCTCCT GTGCCCCCAC CGCAACAGCC 001440 001441 ACAGGCAGAG GAGGACGAGG ACGACTGGGA ATCCTAGGGG GCTCCATGAC ACCTTCCCCC CCAGACCCAG ACTTGGGCTG 001520 001521 TTGCTCTGAC ATGGACACAG CCAGGACAAG CTGCTCAGAC CTGCTTCCCT GGGAGGGGGT GACGGAACCA GCACTGTGTG 001600 001601 GAGACCAGCT TCAAGGAGCG GAAGGCTGGC TTGAGGCCAC ACAGCTGGGG CGGGGACTTC TGTCTGCCTG TGCTCCATGG 001680 001681 GGGGACGGCT CCACCCAGCC TGCGCCACTG TGTTCTTAAG AGGCTTCCAG AGAAAACGGC ACACCAATCA ATAAAGAACT 001760 001761 GAGCAGAAA |
Predicted Small Protein
Name | NONHSAT139255_smProtein_686:982 |
Length | 99 |
Molecular weight | 10797.0751 |
Aromaticity | 0.0918367346939 |
Instability index | 62.5603061224 |
Isoelectric point | 4.09381103516 |
Runs | 13 |
Runs residual | 0.00638947167652 |
Runs probability | 0.0448140448141 |
Amino acid sequence | MLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQVPEIDVPSYLPDLPSIANDLM YSADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYKMGY |
Secondary structure | LLLLHHHHHHLLLLLLLLHHHHHHHLLLLLLEEELLLLLLLLLLLLLLLLLLHHHHHHHH HHLLLLLLLLLLLLLLLLLLLLLLHHHHLHHHHLLLLL |
PRMN | - |
PiMo | - |